Protein Data Bank
- 3D 11EX: Crystal structure of hIgG1-Fc in complex with FcRL5
- 3D 11GL: Crystal structure of mSTING in complex with 2'3'-cUMP-AMP
- 3D 11GM: Crystal structure of mSTING in complex with 3'3'-cUMP-AMP
- 3D 11GN: Crystal structure of mSTING in complex with 3'3'-di-AMP
- 3D 11GQ: Cryo-EM structure of human CNNM4(E284A) tetramer with Magnesium and MgATP in outward-facing state
- 3D 11RM: Cryo-EM structure of human exportin-1 conjugated with FR-027*
- 3D 12AD: Structure of mammalian Type 2 Inositol 1,4,5-trisphosphate receptors (IP3R2) in the Apo-state
- 3D 12AI: Structure of mammalian Type 2 Inositol 1,4,5-trisphosphate receptor (IP3R2) in the presence of IP3/Ca2+/ATP
- 3D 12BI: Moorella thermoacetica LarC (conformation 1)
- 3D 12BJ: Moorella thermoacetica LarC (conformation 2)
PDB Nitrogen Cycle
- 3D 12CL: Crystal structure of canine myeloperoxidase inhibited by SPIN from Staphylococcus delphini
- 3D 28MB: Structure of Human Aldehyde oxidase under TCEP-reducing conditions
- 3D 29VY: Structure of Tetrahydrocannabinolic acid synthase(THCAS) in complex with FAD
- 3D 29VZ: Structure of Tetrahydrocannabinolic acid synthase(THCAS) in complex with FAD
- 3D 29WA: Structure of Cannabidiolic acid synthase(CBDAS) in complex with FAD
- 3D 31OX: Cryo-EM structure of the CO dehydrogenase (CODH) subcomplex from Methanosarcina acetivorans
- 3D 32FI: CryoEM structure of the E494A Quinol-Dependent Nitric Oxide Reductase
- 3D 9NTL: Crystal structure of NP202 TCR
- 3D 9PR2: Crystal structure of thermostable variant of phosphite dehydrogenase from Pseudomonas stutzeri in complex with NAD
- 3D 9PT7: Structure of a P-loop mutant PTP-like myo-inositol phosphatase from Selenomonas ruminantium in complex with myo-inositol-(1,2,5,6)-tetrakisphosphate
PDB Photosynthesis
- 3D 28MB: Structure of Human Aldehyde oxidase under TCEP-reducing conditions
- 3D 29VY: Structure of Tetrahydrocannabinolic acid synthase(THCAS) in complex with FAD
- 3D 29VZ: Structure of Tetrahydrocannabinolic acid synthase(THCAS) in complex with FAD
- 3D 29WA: Structure of Cannabidiolic acid synthase(CBDAS) in complex with FAD
- 3D 31OX: Cryo-EM structure of the CO dehydrogenase (CODH) subcomplex from Methanosarcina acetivorans
- 3D 9S1L: Cryo-EM structure of Posidonia oceanica PSI-LHCI supercomplex
- 3D 9S1M: Cryo-EM structure of Posidonia oceanica L-PSI-LHCI-LHCII supercomplex
- 3D 31LC: X-ray structure of Thioredoxin reductase (TrxR) from Burkholderia cenocepacia (Bc-TrxR)
- 3D 36TD: Crystal Structure of IDH2 (R172K) in complex with covalent inhibitor LY3410738
- 3D 36UI: Crystal Structure of IDH2 (R140Q) in complex with covalent inhibitor LY3410738
PDB PFAS Degradation
- 3D 22TY: Crystal structure of AstC terpene cyclase domain
- 3D 22TZ: Crystal structure of AstC in complex with farnesyl pyrophosphate
- 3D 22UA: Crystal structure of AstC terpene cyclase domain in complex with albicanoyl monophosphate
- 3D 9RZY: X-ray structure of the alpha-L-fucosidase MfAlfDGH29 from Mariniflexile fucanivorans bound to L-fucose
- 3D 28SV: Structure of ASBT homologue from Leptospira biflexa in inward-facing form (Crystal Form 1)
- 3D 9ZIO: Crystal Structure of RASProtease(II), a Designed RAS-specific Subtilisin
- 3D 27QY: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound AHQ
- 3D 27QZ: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound B1HQ
- 3D 27RA: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound BA
- 3D 27RB: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound BC
Project Gutenberg
- The Count of Monte Cristo EPUB PDF
- The Gods of Mars EPUB PDF
- The Adventures of Sherlock Holmes EPUB PDF
- The War of the Worlds EPUB PDF
- The Invisible Man EPUB PDF
- Bleak House EPUB PDF
- Anna Karenina EPUB PDF
- The Republic EPUB PDF
- The Essays of Montaigne EPUB PDF
- A Christmas Carol EPUB PDF
- A Doll's House EPUB PDF
- David Copperfield EPUB PDF
- The Time Machine EPUB PDF
- The Odyssey EPUB PDF
- A Modest Proposal EPUB PDF
GitHub bioRxiv
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Ishihara-SynthMorph/pykarambola
6
Jupyter Notebook
a python package for computing Minkowski tensors from 3D surfaces and images
-
mims-harvard/ToolUniverse
1603
Python
Democratizing AI scientists with ToolUniverse
-
tsenoner/protspace
14
TypeScript
Explore protein language model embeddings in your browser β surface relationship...
-
eugenevinitsky/lea
10
TypeScript
bluesky portal for researchers
-
anthropics/knowledge-work-plugins
23228
Python
Open source repository of plugins primarily intended for knowledge workers to us...
-
lucidrains/alphafold3-pytorch
1680
Python
Implementation of Alphafold 3 from Google Deepmind in Pytorch
-
bede/deacon
119
Rust
Fast DNA search and [host] depletion using minimizers
-
Imbad0202/academic-research-skills
40451
Python
Academic Research Skills for Claude Code: research β write β review β revise β f...
-
FJingxian/JanusX
34
Rust
A high-performance, ALL-in-ONE suite for quantitative genetics that unifies geno...
-
Francis1998/scholar-rag-agent
44
Python
Production-grade Agentic RAG for scientific literature β multi-hop reasoning, Gr...
Synthetic Biology
- Caffeinated Coli: Inspiring the Next Generation of Scientists through Synthetic Biology.
- Surface architecture of the bacterial envelope determines phage adsorption route in pathogenic Escherichia coli O157:H7.
- The "dark magic mushroom" co-produces amatoxins and psilocybin.
- Productive Mayaro Virus Infection Requires Host Fatty Acid Synthase for nsP1 S-palmitoylation.
- A molecular description of plant cellulose biosynthesis inhibition.
- Crystal structures of a far-red photoreceptor in different light-absorbing states: insights into spectral tuning and light signaling.
- CHH methylation is recruited to gene-proximal transposable elements during repeated drought stress.
- Metabolic engineering of Escherichia coli to modulate hydrogen sulfide levels in the mammalian gut.
- Thiooxazole Formation on a Nontypeable Haemophilus influenzae Virulence Factor Requires a Mixed-Valent Diiron Cofactor.
- Deuterium-depleted water modulates lipid metabolism in the freshwater microalga Chlorella sp.
- Responsible biotechnology: an analysis of the Asilomar 2025 entreaties.
- Gram-scale production of forskolin in yeast through biosynthetic network elucidation and pathway optimization.
- Biosynthesis of isoprene glycol from glucose by metabolically engineered Escherichia coli.
- ROS signaling mediates aeration-dependent thermotolerance in Kluyveromyces marxianus for high-temperature xylitol production.
- Beyond the parasite: reframing cutaneous leishmaniasis as a host-microbiome-vector ecosystem.
Biotechnology
- Orthogonal CRISPR screens and human liver chimeric mice identify hepatitis B virus host factors.
- AAV-mediated age- and circuit-dependent restoration of photoreceptor synaptic structure and function in Ξ±2Ξ΄4-associated retinal synaptopathy.
- Caffeinated Coli: Inspiring the Next Generation of Scientists through Synthetic Biology.
- EXCAVATE-HT: A Bioinformatic Pipeline to Identify Targetable Genomic Variants for Allele-Specific Editing.
- Intracellular pathogen targeting by IL32 elicits cell-autonomous immunity.
- Crystal structures of a far-red photoreceptor in different light-absorbing states: insights into spectral tuning and light signaling.
- Host-Informed Engineering of Glycosylation in Komagataella phaffii for Human Biantennary N-Linked Glycans.
- EMT activates ER-to-Golgi trafficking through upregulation of REEP2 to promote lung cancer progression.
- Germline Variants in Centromere Binding Protein 126 Predispose to Glioblastoma.
- A chicken interferon stimulated gene screen reveals limited genes restricting influenza replication.
- Enzymatic Defluorination of Perfluorooctanoic Acid by an Evolutionarily Distinct Haloacid Dehalogenase.
- A systems-level proteomic analysis identifies kinesin targets of KIFBP during neuronal development.
- The tuxedo sea urchin Mespilia globulus : A fast-developing and tractable model for genomic and developmental biology.
- A highly penetrant LMNA R541C variant associated with dilated cardiomyopathy leads to dysregulation in metabolism and proliferation pathways in stem cell-derived cardiomyocytes.
- ER Stress-Response Signaling Regulates Chamber-Specific Growth between Right and Left Ventricles during Postnatal Development.
AI & Machine Learning
- Predictors of High Fertility in Nigerian Women Aged 40-49: Insights from Machine Learning and Explainable Artificial Intelligence Using the 2024 Nigeria Demographic Health Survey.
- Multimodal Acoustic-Linguistic Machine Learning for Postpartum Depression Screening Using the Edinburgh Postnatal Depression Scale.
- Using a Machine-Learning Algorithm to Identify Palliative Care Needs in a Primary Care Population: A Pilot Study.
- Extracellular Matrix Proteomic Signatures Associate with Disease-Free Survival in Later Events of Ductal Carcinoma In Situ or Invasive Breast Cancer.
- ProteinDock: A physics-informed layer to improve protein-protein docking reliability.
- Deep interpretable learning of sample representations for characterizing disease states in single-cell transcriptomics.
- GEM-GPT Enables Personalized Cell Type-Resolved Therapeutic Design for Systems Pharmacology.
- Pansoma, a machine learning tool for identifying somatic variants using pangenome graphs.
- PertReason: A Knowledge-Grounded Benchmark and Framework for Cell-State-Conditioned Mechanistic Reasoning of Perturbation Effects.
- Learning shared forecast-error structure to improve ensemble forecasts of seasonal respiratory outbreaks.
- Death in People with Down syndrome: Mortality statistics and novel predictors in US Medicaid and Medicare enrolled adults.
- AI-Enabled Echocardiography Identifies an Adverse Epicardial Adiposity Phenotype Associated with Cardiometabolic Dysfunction.
- Ensembles of in silico structures enable T cell peptide-MHC binding prediction.
- Forecasting Trajectories of Physiological Mechanics with Sparse Clinical Data Using a Data Assimilation and Machine Learning Hybrid.
- AI-Assisted Hyperspectral Interferometry and Single-Cell Dispersion Imaging.
Neuroscience
- First 3-Day Severe Pediatric Traumatic Brain Injury Guideline Adherence Rates in South American Intensive Care Units by Guideline, Patient, and Clinical Care Characteristics.
- Fever Burden and Neurological Outcome in Traumatic Spinal Cord Injury.
- The Neuroimmune Nexus: Diet-Induced Obesity, Inflammation, and Diet-Modulated Recovery Following Traumatic Brain Injury.
- Traumatic Brain Injury and Risk of Amyotrophic Lateral Sclerosis Mortality: A Traumatic Brain Injury Model Systems Study.
- Persistent Symptom Burden Following Mild Traumatic Brain Injury Is Associated With Lower Quality of Life in Middle-Aged and Older Adults.
- Evolution of Diagnosis and Management of Traumatic Intracranial Aneurysms Secondary to Penetrating Brain Injury.
- Transforming Research and Clinical Knowledge in Older Veterans with Acute Traumatic Brain Injury: A Longitudinal Observational Study.
- Injury to Time of Marked Recovery as a New Acute Spinal Cord Injury Outcome Measurement for Statistical Analysis of Interventions and Drug Treatments.
- Inpatient Metabolic Panel Trajectories Improve 6-Month Mortality Prognostication after Severe Traumatic Brain Injury.
- Noise Optimization of Basic Signal Component Extraction for Cryogenic and On-Scalp Magnetoencephalography (MEG).
- Developmental tuning of functional manifold dimensionality across the human brain.
- Epidemiology of Traumatic Brain Injury in Sexual and Gender Minority People: A Matched Single-Trauma Center Study.
- KIF1A-mediated trafficking is required for neuronal autophagy in human neurons.
- Perioperative Discontinuation of Antiplatelet and Anticoagulation Therapy in Chronic Subdural Hematoma: Impact on in-Hospital Mortality, Functional Outcome, and Recurrence.
- Transglutaminase 2 Deletion Enhances Astrocyte-to-Neuron Metabolic Support and Attenuates Subacute Pathology Following Repetitive Mild Traumatic Brain Injury.
Climate Science
- Coupling machine learning with a biophysical model for maturity date prediction of apple fruit across China's apple planting regions.
- Climate and plant life-history traits as drivers of seed germination niches.
- Choosing to take it cool: a pilot study on changes in gestating sows laying area preference when given access to resting areas with floor-cooling during summer heat.
- Predicted decline in common bird and butterfly species even under conservation policy scenarios in Europe.
- Meat allergy is on the rise - what scientists want to know.
- Carbon footprint evaluation for waste management of fluorinated anaesthetics in the UK using mathematical modelling.
- Beyond the parasite: reframing cutaneous leishmaniasis as a host-microbiome-vector ecosystem.
- The response of global marine bivalve lipid quality to climate change drivers: temperature, salinity, dissolved oxygen, and aragonite saturation.
- Soil erosion rates, driving factors and climate change impacts across different land uses in the Himalayas: Insights from Caesium-137 ((137)Cs) tracing and the revised universal soil loss equation (RUSLE) model.
- Synergistic amplification and threshold vulnerability of coastal aquifer barriers under sea-level rise and freshwater decline.
- Paying the price of distance: Financial cost and carbon footprint analyses for neurosurgical follow-up in remote pacific Islands.
- Modulation of abiotic stress tolerance by a grapevine cell culture-based biostimulant in tomato plants.
- Environmental outcomes of artificial intelligence.
- Seed priming-mediated molecular responses enhance thermo-osmotic resilience in Halophila ovalis for climate-resilient restoration.
- Genomic insights into flooding tolerance of DistyliumΒ chinense in the water-level fluctuation zone of the Three Gorges Reservoir.
Medicine
- Study Protocol for Feasibility Randomized, Placebo-Controlled Trial of Efficacy of Midazolam as the Second-Line Treatment for Dyspnea in Patients with Advanced Cancer.
- A Microgel-Based Platform for Tunable Expansion and Function of Ξ³Ξ΄ T-cells.
- Fever Burden and Neurological Outcome in Traumatic Spinal Cord Injury.
- Ribonucleotide Reductase Inhibition Overcomes FLT3 Inhibitor Resistance in Acute Myeloid Leukemia.
- Time-resolved phenotyping at subcellular resolution reveals shared principles and key trade-offs across antimicrobial peptide activities.
- Orthogonal CRISPR screens and human liver chimeric mice identify hepatitis B virus host factors.
- Injury to Time of Marked Recovery as a New Acute Spinal Cord Injury Outcome Measurement for Statistical Analysis of Interventions and Drug Treatments.
- Targeted modulation of IGFBP5/IGF1, THPO, and P38 MAPK signaling are potent therapeutic strategies generalizable for mitochondrial respiratory chain disease and osteosarcoma.
- Characterizing Neurologic Recovery after Acute Complete Traumatic Spinal Cord Injury in Relation to Hemodynamic Management with Lumbar Intrathecal Drains.
- Structure-guided targeting of the GATAD2A-CHD4 interaction within the MBD2-NuRD complex results in high levels of HbF in adult erythroid cells.
- Hyaluronan and CD44 targeting reverses early matrix changes, proinflammatory signals and fibrosis in primary sclerosing cholangitis.
- AAV-mediated age- and circuit-dependent restoration of photoreceptor synaptic structure and function in Ξ±2Ξ΄4-associated retinal synaptopathy.
- Menstrual Disorder Frequency Across Ibuprofen and Oral Contraceptive Treatment Modalities in Reproductive-Age Women: A Population-Based Analysis Using the NIH All of Us Research Program.
- Transglutaminase 2 Deletion Enhances Astrocyte-to-Neuron Metabolic Support and Attenuates Subacute Pathology Following Repetitive Mild Traumatic Brain Injury.
- H5N1 influenza binding and cell entry via human class II MHC, and blocking by cross-reactive antibodies.
Genomics
- Bacterial DNA invasion triggers transposable element proliferation and genome expansion.
- Deep interpretable learning of sample representations for characterizing disease states in single-cell transcriptomics.
- A multimodal interrogation of Broca's area in the pediatric and adult human brain.
- GEM-GPT Enables Personalized Cell Type-Resolved Therapeutic Design for Systems Pharmacology.
- HPRC2: A human pangenome reference with near-complete coverage of common genetic variation.
- Pansoma, a machine learning tool for identifying somatic variants using pangenome graphs.
- Lineage-specific change in craniofacial gene regulatory networks of syngnathid fishes revealed by integrating multiomics across fishes.
- Prenatal cannabis exposure affects human fetal neurodevelopment: an integrated multi-omics study.
- Trehalose-6-phosphate synthase promotes thermotolerance by governing glycolytic flux in Cryptococcus deneoformans.
- An Integrated Proteomics and Genomics Approach to Identify Essential Protein Kinases During Human Trophoblast Development.
- An Integrated Multi-omics Single Cell Atlas of the Human RPE and Choroid.
- Loom: Multi-Region Analysis of Spatial Transcriptomics with Local Neighborhoods and Global Trajectories.
- PMBB Geno-Pheno Toolkit: A suite of scalable, reproducible pipelines for cross-biobank association analyses.
- Cross-species functional analysis of a de novo DCLK1 variant associated with a neurodevelopmental disorder.
- Host-Informed Engineering of Glycosylation in Komagataella phaffii for Human Biantennary N-Linked Glycans.
Immunology
- Combination Therapy with Pregabalin and Morphine Relieves Dinutuximab-Induced Pain in a 3-Year-Old Girl: A Case Report.
- Anti-Z-NA antibodies can distinguish accessible Z-form states across DNA, RNA, and DNA-RNA substrates.
- ProteinDock: A physics-informed layer to improve protein-protein docking reliability.
- Bacterial surface display enables lysis-independent joint host-pathogen single-cell profiling.
- Cyclic immunofluorescence platform using photocleavable linkers for direct antibody labeling enables cancer phenotyping.
- Sustained Delivery of a SARS-CoV-2 Subunit Vaccine in An Adjuvanted Hydrogel Depot Enhances Vaccine Responses in Nonhuman Primates.
- Haplotype and diversity signatures of ultra-soft selective sweeps in HIV-1.
- Beyond the blood: Tissue-resident immunity shapes SARS-CoV-2 vaccine antibody responses.
- Human antibody heavy chain variable region exon interacts with 3' regulatory region to form a stable somatic hypermutation center.
- Human inherited RORΞ³T deficiency encompasses genetic heterogeneity, T cell deficiency, and clinical homogeneity.
- Germinal center-independent memory B cells provide rapid protection from lethal influenza challenges.
- FlowSpot Enables Decentralized Phenotypic and Functional Cellular Immune Profiling from Dried Blood Spots.
- Elicitation of stem-directed antibodies in rhesus macaques by a conventional hemagglutinin immunogen.
- Post-loading ribonucleic acid into lipid nanoparticle carriers.
- Charge-driven antiviral responses enhance autoreactivity in severe COVID-19.
Microbiology
- LIN-23 Affects C. elegans Pathogen and Stress Resistance by Modulating SKN-1 Activity.
- MeioBIOME: A snakemake workflow for the parallel analysis of meiofaunal genomes and host-associated bacteria/archaea.
- The Aspergillus fumigatus C2-Domain Protein SppA is required for septal integrity and alters susceptibility to echinocandins and neutrophil killing during infection.
- Surface architecture of the bacterial envelope determines phage adsorption route in pathogenic Escherichia coli O157:H7.
- Bacterial surface display enables lysis-independent joint host-pathogen single-cell profiling.
- Beyond the blood: Tissue-resident immunity shapes SARS-CoV-2 vaccine antibody responses.
- Human antibody heavy chain variable region exon interacts with 3' regulatory region to form a stable somatic hypermutation center.
- Cryo-electron microscopy structure of Jabs, a bacteriophage infecting the multidrug-resistant pathogen Mycobacterium abscessus.
- Intracellular pathogen targeting by IL32 elicits cell-autonomous immunity.
- Allograft Inflammatory Factor-1 regulates immune activation states and is required for effective pathogen-specific T cell immunity during infection.
- Social and neuroendocrine phenotypes reprogrammed by endocrine-disrupting chemicals can be mitigated by Limosilactobacillus reuteri modulation of the gut microbiome-thyroid-oxytocin axis.
- Sirtuin 1 Is Required for Optimal Mammarenavirus Multiplication.
- Optimized Surveillance Testing for Toxigenic Clostridioides difficile to Scale Prevention Programs Across Clinical Settings.
- Village-level surveillance of neonatal disease with integrated real-time dashboards and quality-control in Uganda.
- Paralogous guanine deaminases acquired from bacteria by horizontal gene transfer promote purine homeostasis in Caenorhabditis elegans.
Evolutionary Biology
- Evolution of Diagnosis and Management of Traumatic Intracranial Aneurysms Secondary to Penetrating Brain Injury.
- Evolution of compound eye cell types shapes visual behaviors across Heliconius butterflies.
- Blind genomic tree scans identify loci underlying adaptive peaks in Antirrhinum.
- Epistasis facilitates the long-term antigenic evolution of the influenza B virus hemagglutinin.
- Parallel and Divergent Evolution in Pseudomonas aeruginosa Under Constant and Fluctuating Predator-Mediated Selection.
- Isolation and Phylogenetic Analysis of Parapoxvirus orf From Outbreaks in Sheep in the Brazilian Midwest.
- Timescale mismatch: redefining ecological opportunity for evolution in the Anthropocene.
- Supervisory Rashomon: The Evolution of Our Analytic Minds.
- Clonal evolution driving timing and sites of postsurgical recurrences in hepatocellular carcinoma.
- Strategies Enhancing the Efficiency of CoFe-Based Electrocatalysts for Oxygen Evolution Reaction in Alkaline.
- From Metronidazole to Microbiota Restoration: Evolution in the Prevention, Diagnosis, and Treatment of Clostridium difficile Infections.
- Evolution of Achilles Tendon Repair: From Open Surgery to Percutaneous Techniques.
- History and Evolution of Vascular Surgery in Sri Lanka: The Journey and Ongoing Challenge.
- Learning neural evolution operators: From decoding to identifiable causal state-space models.
- Fructophilic lactic acid bacteria as a window into multi-scale convergent evolution.
Molecular Ecology
- A population genomic resource for Drosophila pseudoobscura.
- Revealed-behaviour models to map agri-environment contract feasibility for Finland's semi-natural grasslands and wooded pastures.
- Toxicological effects of a difenoconazole fungicide on a non-target butterfly.
- Assessing the unique effect of land use on fish biodiversity after accounting for water quality.
- Predicted decline in common bird and butterfly species even under conservation policy scenarios in Europe.
- Emerging methods in noninvasive parasite surveillance in wildlife disease ecology.
- Biodiversity: actions lagging behind aspirations.
- Unraveling fungal community biodiversity in table olives through tree-based machine learning classification.
- Heavy metal pollution reshapes macrofaunal biodiversity-ecosystem functioning (BEF) relationships in intertidal zones via selective functional trait modification.
- From individuals to communities: How genomics is transforming biodiversity conservation.
- Biological contamination of macrobenthic communities in seminatural streams: implications for monitoring habitat quality in IsoΓ«tes malinverniana stands.
- Cover trees associations shape bacterial diversity in coffee production systems.
- Umbilical Cord: A Non-Invasive DNA Source for Sea Turtle Genomics.
- Comparative Population Genetics and Fludioxonil Sensitivity of Rhizoctonia solani AG-3 Subgroups from Potato and Tobacco in China.
- Connecting knowledge and action: recommendations to leverage Guatemala's scientific diaspora to address water management challenges.
arXiv Physics
- PDF On Optimal Measurement-State Preparation via Geometric Transport of the Squeezing Ellipse
- PDF Frequency-Domain Analysis of Wave Scattering by Spatially Dispersive Metasurfaces Using the Method of Auxiliary Sources
- PDF Wavefunction-based periodic quantum chemistry
- PDF Quantum Computing Enabled ab initio Molecular Dynamics Simulations
- PDF Joint measurement of cosmic-ray muons and seismic w av es at laboratory scale
- PDF Graph Neural Network Force Fields for Spin Dynamics in Metallic Magnets
- PDF Reliability-calibrated deep residual full-waveform inversion using geometry-invariant physics encoding: synthetic validation and zero-shot Marmousi-2 testing
- PDF Hubbard physics with ultracold polar molecules: on-site interaction energies for shielded molecules
- PDF The Diagnostic Temperature Discrepancy as a Kinetic Measurement: Shape, Transport, and Termination of the Suprathermal Electron Tail
- PDF De mora luminis: Roemer's discovery 350 years later
- PDF Predictability of Human Movements across Industry Sectors using Multilayer Networks
- PDF Matching Trace Element Distribution to Mineralogical Phases in Ancient Biotechnology-Derived Metallic Salts: a Multimodal Analysis
- PDF Large-Aperture All-Solid-State Cascaded Liquid-Crystal Beam Steering for High-Resolution Wide-Field Imaging
- PDF Design and beam-test characterization of the CRILIN semi-homogeneous crystal calorimeter
- PDF Memory compression and physical state augmentation favor different AMOC prediction tasks
arXiv Mathematics
- PDF Path to homology of Yang-Baxter operators
- PDF On Degree Powers in Intersecting Families
- PDF Tampered Memory Elephant Random Walk on One-Dimensional Integer Lattice
- PDF $\mathbb Q\setminus\mathbb Z$ is diophantine over $\mathbb Q$ with $7$ unknowns
- PDF Harmonic, radial, and shell stability of the weighted Einstein constraints on the sphere at infinity
- PDF Explicit Matrices over $\mathbb Z_2$ with CNOT and Row Complexity $4n-\mathrm{o}(n)$ and Local Logic Gates
- PDF Nonnuclear Bunce-Deddens algebras
- PDF The Complexity of Kemeny Aggregation with Three Rankings
- PDF Boundedness of polarized foliated surfaces
- PDF Set-theoretic universes and paradoxes in 2-topoi
- PDF On two differing geometric descriptions of the passage from microscopy to macroscopy in Markov diffusion theory
- PDF Relativistic transport near moving interfaces
- PDF From Kreweras walks to branching perimeter processes of percolated triangulations
- PDF Sumsets and generalized arithmetic progressions in multiplicative subgroups
- PDF Completeness of the Model Space Does Not Force Regularity for Infinite-Dimensional Lie Groups
arXiv Computer Science
- PDF Learning to Trace Seiberg Dualities
- PDF ReToken: One Token to Improve Vision-Language Models for Visual Retrieval
- PDF ACE-Data-0: Human-Centric Ambient Capture as Embodied Data Engine
- PDF PhiZero: A World Model Built Around Physical Language
- PDF PAC-MAN: Perception-Aware CBF-RL for Whole-Body Safety in Humanoid Dodgeball
- PDF AskChem: Claim-Centered Infrastructure for Chemistry Literature Synthesis
- PDF AISPA: User-Centric System Prompt Auditing for Large Language Model Applications
- PDF Chimera: Designing and Chinchilla-Scaling Hybrid Visual Diffusion Transformers
- PDF Learning Arbitrary Lindbladians from Time Evolution
- PDF OSReward: Instituting Standardized Evaluation for Cross-Platform Computer-Use Reward Models
- PDF KAISEN: Reproducible Subgroup Fairness Auditing for Clinical Risk Models
- PDF Inducing language models to assert their own consciousness restores human beliefs and values
- PDF Using Theory of Mind to Arbitrate between Social and Non-social Learning
- PDF FA-RDP: A Frequency-Adaptive Reactive Diffusion Policy for Contact-Rich Manipulation
- PDF Beacon: Knowing When and How to Perform Agentic Visual Reasoning
arXiv Quantitative Biology
- PDF KAISEN: Reproducible Subgroup Fairness Auditing for Clinical Risk Models
- PDF Using Theory of Mind to Arbitrate between Social and Non-social Learning
- PDF Multi-scale measures of time-varying epidemic spread on human mobility networks
- PDF Causal Architecture Dynamics Prior to Arrival of Self-replicators in a Model of Catalytic Networks Relevant to Origin-of-Life
- PDF Hash Chemistry: Minimal Models for Evolutionary Growth of Complexity
- PDF Stimulus-Evoked Network Dynamics in Human Cortical Organoids: From a Graph-Computational Framework to Repeated-Stimulation Depression
- PDF A data-driven stage-structured host-parasitoid model for optimizing Trichogramma interventions against soybean pod borer (Leguminivora glycinivorella) outbreaks
- PDF Evolutionary adaptation through bet-hedging in finite populations under fluctuating environments
- PDF The evolution of cooperation under imperfect phenotypic recognition
- PDF Identifying common backbones of interactions underlying food webs via non-deterministic alignments
- PDF ZUNA1.1: A more flexible EEG foundation model for Denoising and Super-resolution
- PDF Hybrid SINDy-EnKF in Learning Chikungunya Dynamics from Incomplete, Noisy or Partially Observed Data
- PDF IndelFreeAligner: A Streaming Aligner for Comprehensive Gapless Alignment Against Terabase-Scale References
- PDF TREA-Net: A Transferable Residual Epidemiological Adaptation Network for Dengue Incidence Forecasting
- PDF Navigation driven by bidirectional information transmission between sensing and actuation
arXiv Quantitative Finance
- PDF Train Often, Deploy Selectively: Forward-Gated Model Replacement in Crypto Markets
- PDF Can Large Language Models Execute Parent Orders?
- PDF Optimal Execution with Passive Market Impact
- PDF Bootstrap inference in autoregressive duration models
- PDF Boundary-Induced Apparent Risk Aversion in Nonergodic Multiplicative Growth
- PDF Almost stochastic dominance via optimal transport
- PDF FinSMART: Financial Sentiment Analysis for Algorithmic Trading through Market-Aligned Reinforcement Learning
- PDF ZAPs: A Reward Attribution Framework for DeFi Ecosystems with Adversarial-Robust Scoring via Parallel Anomaly Ensemble Detection
- PDF FinanceHarness: Autonomous Financial Deep Research Framework
- PDF Pricing and Semi-static Hedging of Green Pay-as-produced Power Purchase Agreements
- PDF Multi-maturity consistency of option prices under bounded bid-ask spreads: a minimal obstruction and an exact two-date basket operator
- PDF AWARE-FX: An Auditable Knowledge-Guided AI System for Measuring Corporate Foreign-Exchange Hedging Disclosure
- PDF Local Stochastic Rough Volatility: Pathwise Filtering and the Conditional Density Equation
- PDF Consuming Values
- PDF Lucky or Good? Outcome Noise, Effective Sample Size, and the Attribution of Skill