Protein Data Bank
- 3D 10FC: E. coli TGT covalent intermediate with 2 tRNAs
- 3D 10GJ: Nucleosome containing an 8oxoG:A at SHL-6
- 3D 10GK: Nucleosome containing an 8oxoG:A at SHL+4
- 3D 10GL: Nucleosome containing an 8oxoG:A at SHL+3
- 3D 10GM: Nucleosome containing an 8oxoG:A at SHL+2
- 3D 10GN: Nucleosome containing an 8oxoG at SHL+3
- 3D 10GO: Nucleosome containing an 8oxoG at SHL+2
- 3D 10GX: Yeast Blm10 apo Structure
- 3D 10MT: C2 symmetry expanded and subtracted 20S Proteasome, Blm10, Fub1 Complex Halfmer
- 3D 10OG: 20S Alpha 3 Deletion proteasome core particle in complex with Fub1 and Blm10
PDB Nitrogen Cycle
- 3D 24UM: horse myoglobin amyloid fibril - PM3
- 3D 27WM: horse myoglobin amyloid fibril - PM2
- 3D 27WR: horse myoglobin amyloid fibril - PM1
- 3D 28SV: Structure of ASBT homologue from Leptospira biflexa in inward-facing form (Crystal Form 1)
- 3D 31LC: X-ray structure of Thioredoxin reductase (TrxR) from Burkholderia cenocepacia (Bc-TrxR)
- 3D 36TD: Crystal Structure of IDH2 (R172K) in complex with covalent inhibitor LY3410738
- 3D 36UI: Crystal Structure of IDH2 (R140Q) in complex with covalent inhibitor LY3410738
- 3D 9HYK: Crystal structure of Trypanosoma brucei trypanothione reductase (TbTR) bound to PROTAC-1
- 3D 9HYL: Crystal structure of Trypanosoma brucei trypanothione reductase (TbTR) bound to PROTAC-3
- 3D 9PF4: Saccharomyces cerevisiae SRP54 NG domain
PDB Photosynthesis
- 3D 31LC: X-ray structure of Thioredoxin reductase (TrxR) from Burkholderia cenocepacia (Bc-TrxR)
- 3D 36TD: Crystal Structure of IDH2 (R172K) in complex with covalent inhibitor LY3410738
- 3D 36UI: Crystal Structure of IDH2 (R140Q) in complex with covalent inhibitor LY3410738
- 3D 9EHO: Octopus ribosome, hybrid 80S
- 3D 9HYK: Crystal structure of Trypanosoma brucei trypanothione reductase (TbTR) bound to PROTAC-1
- 3D 9HYL: Crystal structure of Trypanosoma brucei trypanothione reductase (TbTR) bound to PROTAC-3
- 3D 9PXK: CryoEM structure of Ndh-Ncp complex from Bacillus subtilis with NADH and MK-8
- 3D 9PXL: CryoEM structure of Ndh-Ncp complex from Bacillus subtilis
- 3D 9PXM: CryoEM structure of Ndh-Ncp filament from Bacillus subtilis
- 3D 9RVC: staphylococcus aureus 70S initiation complex with natural mRNA
PDB PFAS Degradation
- 3D 28SV: Structure of ASBT homologue from Leptospira biflexa in inward-facing form (Crystal Form 1)
- 3D 9ZIO: Crystal Structure of RASProtease(II), a Designed RAS-specific Subtilisin
- 3D 27QY: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound AHQ
- 3D 27QZ: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound B1HQ
- 3D 27RA: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound BA
- 3D 27RB: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound BC
- 3D 27RC: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound BMP
- 3D 27RD: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound IPP
- 3D 27RE: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound MPQ
- 3D 27RF: Crystal structure of SR Ca2+-ATPase in E2(TG) with bound PHQ
Project Gutenberg
- A Modest Proposal EPUB PDF
- The Call of the Wild EPUB PDF
- The Bible, Douay-Rheims Version EPUB PDF
- Leviathan EPUB PDF
- The Secret Garden EPUB PDF
- The Count of Monte Cristo EPUB PDF
- Siddhartha EPUB PDF
- Meditations EPUB PDF
- Treasure Island EPUB PDF
- Anthem EPUB PDF
- Crime and Punishment EPUB PDF
- Adventures of Huckleberry Finn EPUB PDF
- The Divine Comedy EPUB PDF
- The Iliad EPUB PDF
- Dracula EPUB PDF
GitHub bioRxiv
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Aperivue/medsci-skills
218
Python
Agent Skills for medical research — literature search, reporting-guideline & cit...
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CultureBotAI/CultureMech
9
HTML
Microbial Culture Media Knowledge Graph - Comprehensive collection of 10,000+ cu...
-
move37-labs/nucleobench
27
Python
Repository for "NucleoBench: A Large-Scale Benchmark of Neural Nucleic Acid Desi...
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api-evangelist/api-evangelist-network
15
HTML
A network index of all APIs.json files maintained by the API Evangelist organiza...
-
songlab-cal/gpn
349
Jupyter Notebook
Genomic Pre-trained Network
-
GoyalLab/CIPHER
8
Jupyter Notebook
CIPHER: Covariance Inference for Perturbation and High-dimensional Expression Re...
-
mims-harvard/ToolUniverse
1592
Python
Democratizing AI scientists with ToolUniverse
-
anthropics/knowledge-work-plugins
23039
Python
Open source repository of plugins primarily intended for knowledge workers to us...
-
Ishihara-SynthMorph/pykarambola
6
Jupyter Notebook
a python package for computing Minkowski tensors from 3D surfaces and images
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genbio-ai/GB-Foundations-Tutorials
6
Jupyter Notebook
Tutorials for GB.Protein and GB.DNA
Synthetic Biology
- Integrated multi-omics profiling reveals dynamic regulation of light-induced chloroplast biogenesis in Brassica napus seedlings.
- Characterization of poly-β-hydroxybutyrate and its biosynthesis in Priestia endophytica UCM B-5715.
- Functional signatures of the gut microbiome in middle-aged regular runners: insights from a metagenomic study.
- Targeting PCNA in Cancer: A Paradigm Shift from Static Inhibition to Dynamic Network Modulation.
- Bacillus amyloliquefaciens ART9 modulates the growth of Radix serratulae Chinensis through rhizosphere microbiome reprogramming and root transcriptomic regulation.
- Next-generation insect pest management: genetic innovations and emerging biocontrol strategies.
- Genome-wide analysis and functional characterization of AsTPS genes in Chinese angelica (Angelica sinensis).
- Invasive Asian water moss (Salvinia cucullata) biochar modulates selected steviol glycoside biosynthesis-related gene expression and drought-associated physiological responses in Stevia.
- Stress-associated transient enlargement of pre-existing adrenal hyperplasia in 21-hydroxylase deficiency: a case report.
- Spray-induced gene silencing targeting ZmHSF20 enhances maize thermotolerance.
- Dynamic remodeling of the gut microbiome and host responses after myocardial infarction revealed by longitudinal metaproteomics.
- Development of abiotic stress tolerance in inoculated apple plantlets with a plant growth-promoting rhizobacterium, Bacillus velezensis strain MWS28 in Korea.
- Culturable bacterial diversity and genome-encoded metabolic potential in Al Wahbah Crater's volcanic soils, Saudi Arabia.
- Haemophilus influenzae tryptophan biosynthesis is required for lung infection.
- In silico dysbiosis-associated neuroprotective metabolite insufficiency in Alzheimer's disease.
Biotechnology
- A structural accessibility principle for LbuCas13a activation by noncontiguous DNA.
- Characterization of poly-β-hydroxybutyrate and its biosynthesis in Priestia endophytica UCM B-5715.
- ANLN: A New Hub in Glutamine Metabolism of Lung Adenocarcinoma by scRNA-Seq and Machine Learning.
- Unraveling the impact of trip12 on neurodevelopment: insights from a zebrafish model.
- The evolving landscape of minimally invasive procedures in musculoskeletal diseases-part I.
- Beyond GMOs: transgene-free gene-edited crops for global food security.
- Next-generation insect pest management: genetic innovations and emerging biocontrol strategies.
- CRISPR-SWITCH (silent mutations with intention to create heterozygotes): a strategy for monoallelic genome editing and generation of a Syt1-D365E mouse model of Baker-Gordon syndrome.
- Research on genetic diversity and genomes of Miscanthus for optimizing their biotechnological potential.
- Prime editing in neuropsychiatric disorders: From mutation-specific target selection to clinical translation.
- Wildlife Trade and Genetic Basis of Disease Susceptibility: A Review.
- Out of Reach: Understanding Resource Barriers to Gene Therapy for Pediatric Patients With Sickle Cell Disease.
- Mapping Antibiotic Resistance Determinants in Oral Streptococci.
- Inhalable Mucoadhesive Redox-Triggered Nanotherapeutics for p53-Mediated Lung Cancer Therapy and Metastasis Suppression.
- Desiccation tolerance mechanisms in the green lineage and beyond.
AI & Machine Learning
- Diagnostic Value of Oxidative Stress-Related Features Mined by WGCNA and Machine Learning in Respiratory Syncytial Virus Infection.
- The High-Intensity Zone: A Dynamic Inflammatory Hub in Lumbar Disc Degeneration.
- Novel AI-Assisted Quest-Based Therapeutic Framework for Enhancing Engagement and Executive Functioning in Attention-Deficit/Hyperactivity Disorder (ADHD): A Case Report.
- The Real "Catch" in Clinical Automation: Rethinking Artificial Intelligence for Healthcare Workflows.
- The Surgeon and the Algorithm: Why the Vatican's Bioethical Blueprint Is Essential for Modern Surgical Practice.
- Predicting the evolutionary and functional landscapes of viruses with a unified nucleotide-protein language model: LucaVirus.
- Self-evolving experimental platform for 3D sand printing.
- A general data-driven framework for scalable electron tomography.
- Smart molecular design of NIR-II organic fluorophores through self-driven iterative evolution, deep learning, and fragment-based assembly.
- Revisiting small-molecule fluorescent probes in food freshness detection.
- Correction: Classification of tuberculosis-related programmed cell death-related patient subgroups and associated immune cell profiling.
- Immune-inflammatory and metabolic signatures for osteoporosis risk stratification in primary Sjögren's syndrome: development and internal validation of an interpretable machine-learning model.
- Translating viral genetic data to PRRSV-2 cross-neutralization using machine learning.
- Multimodal biomarkers in idiopathic sudden sensorineural hearing loss: integrating immune, vascular, and metabolic perspectives for precision medicine.
- Comparative analysis of machine-learning methods for prediction of pilot performance during startle events from neuropsychophysiological features of stress resilience and cognitive task scores.
Neuroscience
- KIF1A-Associated Neurological Disorder (KAND): Spectrum of Movement and Motor Disorders in a Cohort of 51 Patients.
- The Botox Paradox: How Rising Drug Costs and Reimbursement Failures Threaten Access to Botulinum Toxin Therapy in Neurology.
- Effect of Kinesio Taping Combined With Oromotor Stimulation on Feeding Readiness in a Preterm Infant: A Case Report.
- Expanding Neurological Spectrum of Scrub Typhus: A Single-Center Case Series of Cerebral Venous Sinus Thrombosis, Opsoclonus-Myoclonus Syndrome, and Guillain-Barré Syndrome.
- Re-evaluating the Role of Whole Brain Radiotherapy for Brain Metastases From Non-small Cell Lung Cancer in the Immunotherapy Era: A Retrospective Cohort Study.
- The how and why for multiple forms of hippocampal LTP.
- MRI-safe fiber electrodes for neuromodulation in the deep brain.
- Myasthenia gravis with dysphagia as the first symptom and misdiagnosed as anxiety-depressive state: a case report.
- The cell-mediated adaptive immune response to herpes simplex virus type 1 encephalitis: mechanisms and clinical implications.
- The potential of targeted IL-4 therapy for the comorbidity of atopic dermatitis and attention-deficit/hyperactivity disorder in children via the skin-brain axis.
- Allergic diseases in early childhood and their association with migraine: a large-scale retrospective study.
- The ILLUMINATE natural history study in colony-stimulating factor 1 receptor-related adult-onset leukoencephalopathy with axonal spheroids and pigmented glia.
- Unraveling the impact of trip12 on neurodevelopment: insights from a zebrafish model.
- Development of an age-specific paediatric 2-[(18)F]fluoro-2-deoxy-D-glucose PET template aligned with paediatric brain development regularities: enhancing epileptogenic zone localization in drug-resistant epilepsy.
- Survival and neurological outcome in patients treated with extracorporeal membrane oxygenation and therapeutic hypothermia: an updated systematic review and meta-analysis.
Climate Science
- Impact of minimal flow anaesthesia on anaesthetic gas consumption and carbon emission - A prospective observational study.
- Redox homeostasis under summer stress: targeted ROS modulation by foliar kaolin-silicon mixtures in Vitis vinifera L.
- The limits of sustainability of peat as a soilless media for agriculture.
- Geographical Information Systems-Based Wildfire Risk Analysis of Canadian Dialysis Facilities.
- Reuse of maize lime cooking wastewater supports circular economy practices in Mexican food systems.
- Climate-Driven Shifts in Crimean-Congo Hemorrhagic Fever Epidemiology in Kazakhstan.
- Climate Change and African Agricultural Resilience: A 10-Year Comprehensive Review of Adaptive Capacity, Policy, and Environmental Stewardship.
- Water quality and flow dataset from a degraded peatland catchment: Storm events and treatment pond performance.
- Candida auris: a review of global epidemiology, multidrug resistance, and infection control in healthcare-associated outbreaks.
- Agroforestry protects arable crops from climate shock during critical early-season phenological stages.
- Creation and Psychometric Validation of "Nursing Competencies Questionnaire on Older People's Environmental Health (NCQ-OPEH)" in Nurses and Nursing Students.
- Hantavirus: A Comprehensive Narrative Review of Virology, Epidemiology, Pathogenesis, Clinical Manifestations, Diagnostics, and Emerging Therapeutic Strategies.
- Water Availability and Air Humidity Strongly Affect Photosynthesis in Biofilms on Tree Trunks: Predictions for a Climate-Changing World.
- Insight into eco-epidemiological traits of European native vector mosquitoes for disease transmission.
- Impact of climate change on the global circulation of chikungunya virus: current evidence, future projections, and adaptation strategies.
Medicine
- Peri-procedural vs. post-procedural mortality after endobronchial valve treatment for severe emphysema: a systematic review and meta-analysis of randomized controlled trials.
- Phytoremediation ability of Hydrocotyle umbellata L. under different arsenic treatment levels by applying supervised statistical and machine analysis.
- Speech and Language Therapists' Views and Experiences of Working With People With Wernicke's Aphasia: A Qualitative Interview Study.
- The Role of Chemotherapy in Pediatric Myoepithelial Carcinoma: A Systematic Review of the Literature.
- Determining Parental Factors for Clinical Trial Attrition in Pediatric Acute Lymphoblastic Leukemia.
- Change to the recognition and revision of target problems and target problem procedures during eight-session cognitive analytic therapy for self-harm.
- Exploring the lived experiences of individuals with cystic fibrosis after the implementation of elexacaftor/tezacaftor/ivacaftor for treatment.
- mTOR-Gut Microbiome Interaction in Aging: Fusobacterium nucleatum, Resistance Training and Multi-nutrient Supplementation Effects in Aged Male Rats.
- Natural Killer Cells in Paediatric Soft Tissue Sarcomas: A Systematic Review.
- Comparison of outcomes after DA-EPOCH-R or GMALL high-intensity therapy for front-line treatment of Burkitt lymphoma: A retrospective cohort.
- ETTAS: a modular aptamer-recruited platform for programmable translational activation.
- The High-Intensity Zone: A Dynamic Inflammatory Hub in Lumbar Disc Degeneration.
- Diagnosis and Off-Label Treatment of Subcutaneous Putative Dracunculoid Nematodes in Apteronotus albifrons Originating From Wild-Caught Fisheries.
- Preliminary Clinical Experience in the Treatment of Recalcitrant Plantar Heel Pain With Stromal Vascular Fraction: Short- and Long-Term Findings From a Case Series.
- Enhancing Healing in Oral Surgical Procedures: A Review on Biomaterials, Growth Factors, and Tissue Engineering.
Genomics
- Single-cell and spatial profiling reveal an IL-10-associated iCAF-M2 macrophage communication axis in high-grade serous ovarian cancer ascites.
- Immunologically-based nutritional status assessment amongst preoperative colorectal cancer patients - does it link to TNM stage.
- Spatial transcriptomics reveals molecular differences associated with malignant transformation in oral epithelial dysplasia.
- Epigenetic Modulators and Immunotherapy in Malignant Melanoma.
- Integrated Multi-Omics and Spatial Transcriptomics Reveal GUK1 as a Prognostic Biomarker Regulated by the TP53-HSF1 Axis in Breast Cancer.
- UCP2 Identifies Immunosuppressive Tumor-Associated Macrophages and Is Associated with Predicted Immunotherapy Resistance in Glioma.
- Bacillus amyloliquefaciens ART9 modulates the growth of Radix serratulae Chinensis through rhizosphere microbiome reprogramming and root transcriptomic regulation.
- Occurrence of β-lactamases among Enterobacterales isolates from 22 US hospitals in a 10-year period: report from the International Network for Optimal Resistance Monitoring (INFORM) programme.
- Nursing roles, competencies, and education in precision oncology: a scoping review.
- Asiatic acid from Centella asiatica alleviates renal fibrosis: coordinated modulation of the gut-kidney axis and retinol metabolism.
- Glucose-lipid metabolic dysregulation and sleep fragmentation in obstructive sleep apnea: insights from a large-scale cross-sectional study and exploratory hypoxia-related single-nucleus transcriptomic analysis.
- A prognostic signature based on methionine metabolism-related genes for cervical cancer: integrated transcriptomic and experimental validation.
- Astrocyte epigenetics in development, aging, and neurodegeneration: a DNA methylation perspective.
- Climate Change and African Agricultural Resilience: A 10-Year Comprehensive Review of Adaptive Capacity, Policy, and Environmental Stewardship.
- Reconstruction and Paleogenetic Characterization of the Genome of Princess Maria Vsevolozha, Wife of Grand Prince Vsevolod the Big Nest.
Immunology
- Ant abaecin-2 is a context-dependent copper-binding effector that can be either inhibitory or protective.
- Assessment of Knowledge, Attitudes, and Practices Regarding Cervical Cancer and Its Vaccine Among Adolescent Girls at an Urban Health Training Center in Chhallapura, Datia, Madhya Pradesh: A Community-Based Study.
- A Rare Case of Plasmablastic Myeloma With Dual Kappa and Lambda mRNA Expression Presenting as a Solitary Hard Palate Tumor.
- Predicting the evolutionary and functional landscapes of viruses with a unified nucleotide-protein language model: LucaVirus.
- Applications of chitosan derivatives as adjuvants for nanoparticle-based vaccines: A comprehensive review.
- KRAS G12C inhibitors in KRAS(G12C)-mutated solid tumors: an immunologically informed systematic review and reconstructed individual patient data meta-analysis.
- A network meta-analysis of endocrine adverse events induced by immune checkpoint inhibitors in colorectal cancer.
- Myasthenia gravis with dysphagia as the first symptom and misdiagnosed as anxiety-depressive state: a case report.
- Immunosenescence modulates radiation-induced anti-tumor immunity: implications for personalized immuno-oncology.
- Translating viral genetic data to PRRSV-2 cross-neutralization using machine learning.
- Dual Inhibition of TNF-α and IL-6R mitigates cytokine release syndrome via protection of endothelial integrity and reduction of organ damage in mouse models.
- Research Advances in Drug Resistance Mechanisms to Anti-HER2 Therapy in HER2-Positive Breast Cancer.
- Cancer Drug Development in Never-Smoker Lung Cancer: Targeted and Immune-Based Therapeutic Strategies.
- TGFβ Blockade by Inhibition of Enolase-1-Mediated Plasmin Targets Tumor-Associated Macrophages in Pancreatic Ductal Adenocarcinoma.
- Crosstalk between Extracellular Vesicles and the Tumor Microenvironment: Mechanistic Insights and Therapeutic Opportunities.
Microbiology
- mTOR-Gut Microbiome Interaction in Aging: Fusobacterium nucleatum, Resistance Training and Multi-nutrient Supplementation Effects in Aged Male Rats.
- Immunologically-based nutritional status assessment amongst preoperative colorectal cancer patients - does it link to TNM stage.
- Multifunctional antimicrobial effects of Lactobacillus johnsonii against A/E pathogens Enteropathogenic E. coli and Citrobacter rodentium.
- CD19, immunoglobulin level, and varied anti-cytokine autoantibodies underline dichotomous susceptibility to types of infection in patients with thymomas.
- MicroRNAs in periodontal disease: from pathogenic mechanisms and RANKL/OPG regulation to nanoparticle delivery and personalized medicine.
- Immunological mechanisms and prevention strategies for febrile seizures in children.
- Advances in Helicobacter pylori-mediated oncogenic signaling pathways in gastric cancer: From pathological evolution to clinical application prospects (Review).
- Functional signatures of the gut microbiome in middle-aged regular runners: insights from a metagenomic study.
- The Intratumoral Microbiota in Breast Cancer: Roles in Progression, Immunity, and Therapy.
- Right forearm wound and soft tissue abscess complicated with sepsis due to Streptococcus suis: a case report.
- Anatomical and morphological variations associated with in vitro micrografting in olives, using clonal rootstocks.
- Bacillus amyloliquefaciens ART9 modulates the growth of Radix serratulae Chinensis through rhizosphere microbiome reprogramming and root transcriptomic regulation.
- A contemporary overview of severe community-acquired bacterial infections in pediatric intensive care units.
- From infection to cholangiocarcinoma: Why opisthorchiids break these rules.
- First reported case of Aliarcobacter butzleri gastroenteritis in a pediatric patient in Greece.
Evolutionary Biology
- Smart molecular design of NIR-II organic fluorophores through self-driven iterative evolution, deep learning, and fragment-based assembly.
- Advances in Helicobacter pylori-mediated oncogenic signaling pathways in gastric cancer: From pathological evolution to clinical application prospects (Review).
- DFT investigation of the Si-As co-doped SrTiO(3) perovskite for hydrogen evolution via water splitting under UV-vis irradiation.
- Exploratory metatranscriptomic survey of bat-associated RNA viruses in Quzhou city, China.
- Characterization of mitochondrial genomes in six newly sequenced species and analysis of gene rearrangements across Encyrtidae (Hymenoptera, Chalcidoidea).
- Concurrent B-cell acute lymphoblastic leukemia and plasma cell neoplasm with plasmablastic features supporting divergent evolution from a shared precursor: a case report.
- The interaction of biological network topology and mutation effects in complex trait evolution.
- Evolution of guidelines for the management of foreign body airway obstruction from 2005 to 2025.
- Correction: Tomato spotted wilt virus in tomato from Croatia, Montenegro and Slovenia: genetic diversity and evolution.
- Evolution of brain-computer interface technologies for stroke rehabilitation: a bibliometric integration of neural decoding and functional recovery (2016-2025).
- Editorial: The evolution in pharmacology of infectious diseases: 2025.
- Rapid relapse in triple-negative breast cancer: clinical patterns, platinum resistance, and implications for clonal evolution.
- Photodynamic therapy for oral mucosal lesions: photosensitizer evolution, pharmacological mechanisms, and clinical translation.
- The Single-Cell Atlas Revolution: Integrating Lineage, Space, and Evolution to Decode Animal Biology.
- Organic-Inorganic Interfacial Charge-Directed Migration for Enhanced Photocatalytic Hydrogen Evolution Over Cu(x)O/Hydrogen-Bonded Organic Frameworks/Persistent Luminescence Nanoparticle Heterojunctions.
Molecular Ecology
- The "GfI-Fischartenatlas" of the German Ichthyological Society (GfI) - A compilation of validated fish species occurrence records.
- Baseline riparian forest and aquatic macrophyte vegetation dataset from the Danube right bank near Draž (Croatia), to support before-after monitoring of side-arm reconnection (2024-2025).
- First record of Scina nana Wagler, 1926 (Crustacea, Amphipoda, Hyperiidea) in Mediterranean Sea from the northern coastal waters north of Syria (eastern Mediterranean).
- Global microplastic pollution poses a disproportionate reproductive threat to critically endangered marine fishes.
- The interaction of biological network topology and mutation effects in complex trait evolution.
- Non-native and invasive tree species are abundant in neotropical secondary forest but decline over time.
- Seasonal Trade-Offs Between Sedimentary Bacterial Generalists and Specialists Sustain Community Stability in Rivers.
- Advances in water transparency research: Mechanistic insights and multi-scale monitoring innovations.
- The tripartite framework of parasite virulence: drivers, consequences, and implications for wildlife and public health.
- The dilution effect of stocking and the loss of wildness among North American mallards.
- Who gains and who loses - the impact of maize cultivation on breeding birds in central Europe.
- Reversing vegetable biodiversity loss to diversify diets.
- Climate Change Enhances the Success of Marine Invasive Species.
- Captive breeding strategies for ornamental snakehead Channa andrao: dose-dependent reproductive performance, embryonic development, and mouthbrooding behaviour under GnRHa induction.
- A Systematic Review: Deep Learning for Analyzing Genomic Data to Discover Evolutionary Patterns.
arXiv Physics
- PDF An integrated all-van der Waals nanobeam laser
- PDF Strategic Plan for Neutral Atom Quantum Computation
- PDF Bayesian evidence adaptive pursuit to identify neutron sources with scatter-based spectrometers
- PDF Experimental realization of a rotating radio-frequency ion trap for precision metrology
- PDF Axel Dieter Becke: Not just the "B" in "B3LYP"
- PDF Diffusion posterior sampling enables zero shot kilometre scale wind forecasting over complex terrain
- PDF Rack-integrated quantum dot-based source of single and entangled photons at telecom C-band
- PDF Approximating committor functions: Objective functions and training data sampling
- PDF Cycle-Consistent and Uncertainty-Aware Neural Surrogates for Tokamak Edge Plasmas
- PDF Towards more accurate natural orbital functional approximations: including 4-index cumulant contributions
- PDF Polaritons of inherently interacting molecules
- PDF Flexible generation of daily Earth system model projections across radiative forcing scenarios
- PDF Graph Neural Network Force Fields (GPTFF-mol) for Organic Molecules from Optimization Trajectories (OpenGEM26)
- PDF Langmuir probe and infrared thermography measurements of wide and narrow heat flux profiles in the ST40 tokamak
- PDF Embodied inquiry with AI as facilitator: an exploratory case study
arXiv Mathematics
- PDF Eigenfunctions, free boundaries, and time-frequency localization
- PDF The Frankl--Tokushige product conjectures for $r$-cross-intersecting families
- PDF Barzilai-Borwein Fails Superlinear Convergence on an Open Set of Quadratics for Every Dimension $n\geq 4$
- PDF The Stability Landscape in Wave-Packet Scattering: Geometric Rigidity and Sharp Sobolev Thresholds
- PDF Generic degrees of real polynomial Keller maps with non-dense image
- PDF Tight Hamilton Cycles in Linearly Quasirandom 3-Graphs
- PDF On the integral algebraic K-theory of Morava K-theory
- PDF Arithmetic progressions in a random set on a budget
- PDF Optimal use of a black-box learner in semiparametric estimation
- PDF The Faber-Krahn position of convex bodies and Gaussian measure inequalities
- PDF Conformal Kähler rigidity of Einstein four-manifolds
- PDF Simultaneous non-vanishing of Dirichlet $L$--functions, II: Weighted central limit theorem
- PDF Unified theory of classical and quantum semiparametric efficiency
- PDF A new recursive construction for large sets of Kirkman triple systems
- PDF Asymptotic Analysis of Empirical Dynamic Programming in Infinite-Horizon Stochastic Optimal Control
arXiv Computer Science
- PDF 3D-Aware VLMs with Implicit and Explicit Geometries
- PDF Streaming Multi-Agent Autoregressive Diffusion Model with World State Registers
- PDF Unified Video Dense Prediction from Disjoint Data
- PDF Inference-Time Scaling of Diffusion Models via Progressive Seed Pruning
- PDF AXIS: A Growable Community-Driven Data Engine for Scalable Robot Manipulation
- PDF Expanding Flow Maps
- PDF Scale Up Strategically: Learning Compositional Generalization via Bias-Aware Evaluation and Data Collection for Robotic Manipulation
- PDF GraphVid: Interactive Graph-Controllable Video Generation
- PDF Barzilai-Borwein Fails Superlinear Convergence on an Open Set of Quadratics for Every Dimension $n\geq 4$
- PDF Synthetic data generation framework for quality control automation in gravure printing
- PDF Self-Supervised Learning of Structured Dynamics from Videos
- PDF Surprisal Theory is Tautological (without Rational Grounding)
- PDF Beyond Sufficiency: Time Series Explanation with Counterfactual Necessity
- PDF Beyond Episodic Evaluation: Memory Architectural Bottlenecks in Sequential Embodied Question Answering
- PDF MedGame: Storytelling Gamification Empowered by Large Language Models for Medical Education
arXiv Quantitative Biology
- PDF Graph Learning on Ensembles of Cyclic Peptides: An Investigation of Molecular Ensemble Modeling
- PDF Local intercellular coupling is sufficient for long-range calcium signaling
- PDF From Berg-Purcell precision bounds to clock-limited information capacity
- PDF A Kuramoto phase model to explore the synchronisation of a network of circadian clocks
- PDF Evolutionary Le Chatelier's Principle: Phenotypic Plasticity and Genetic Assimilation via Timescale Separation in the Price Equation
- PDF HierarchicalDAEW: Domain-Aware Edge-Weighted Graph Convolution with Evidential Uncertainty for Multi-Section Spatial Gene Expression Prediction from H&E Histology
- PDF Fluctuation impossibility results for stochastic burst networks
- PDF A Bayesian-optimization framework coupling a multiphase PDE tumor model to efficiently design combination therapy schedules
- PDF Importance-Sampling Estimation of Gaussian Molecular Shape Overlap: Exact Union Volumes and Confidence-Bounded Virtual Screening
- PDF Analyzing \b{eta}-Lactamase Evolution from the Principle of Least Action Perspective
- PDF Transition-Related Potentials as Markers of Narrative Comprehension in Continuous EEG
- PDF Perspective Latents as an Architectural Condition for Causal Emergence in Active Inference Agents
- PDF Spectral theory for population density dynamics of spiking neurons with refractoriness
- PDF FMRP-LEAN: A HIPAA-Compliant AI-Augmented LIMS Architecture for End-to-End Clinical Assay Workflow Optimization
- PDF Multi-modal transformer for signal classification in nanopore blockade experiments
arXiv Quantitative Finance
- PDF Portfolio Optimization under Dynamic Rebalancing via Topological Data Analysis and News Sentiments
- PDF Quantifying Sub-Optimality in Routing for Automated Market Makers
- PDF Flux-Corrected Diagonal Frog: second order and positivity at all time steps
- PDF Path-Space Model Risk via Signature-Induced Optimal Transport
- PDF Quantum Kernels and the Cross-Section of Stock Returns: Anatomy of a Vanishing Advantage
- PDF Retail Trader's Ruin: An Anatomy of Popular Signal Failure
- PDF The Science and Practice of Trend-Following Systems
- PDF Gaussian Boson Sampling for Asset Clustering in Statistical Arbitrage Portfolios
- PDF Denoising Subordinated Probabilistic Models: Diffusion with a Tempered-Stable Volatility Clock, and What the Noise Mechanism Actually Controls
- PDF Predictive Extrema, Unprofitable Policies: An AI-Assisted Audit of Candle-Based Binance Spot Timing Models
- PDF Pricing options on illiquid assets using liquid market benchmarks: an application to energy markets
- PDF Observable Matrix Dynamics of Stocks
- PDF Cloud failure and cyber insurance: calibration of stress scenarios and diversification
- PDF Mixing-Law Uncertainty in Multivariate Normal Mean-Variance Mixtures: Semi-parametric Estimation and Robust Cumulative-Prospect Decisions
- PDF Pathwise Portfolio Theory and Market Viability