Protein Data Bank
- 3D 10ME: SemiClosed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a semi-closed active site (closed TL and SI3, open ...
- 3D 10MF: CBR9379 bound Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10MG: CBR9379 bound Open2 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10MI: Closed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a closed active site (closed TL and RH-FL)
- 3D 10MJ: Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
- 3D 10MK: SemiClosed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a semiclosed active site (closed TL, open RH-FL)
- 3D 10ML: AAP-SO2 bound Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
- 3D 11FW: Cryo-EM structure of the bacteriophage N4 virion RNA polymerase (open plug state)
- 3D 11GO: Cryo-EM structure of the bacteriophage N4 virion RNA polymerase (transcription initiation complex)
- 3D 11GP: Cryo-EM structure of the bacteriophage N4 virion RNA polymerase (closed plug state)
PDB Nitrogen Cycle
- 3D 21LA: Olep, Cytochrome P450 epoxidase involved in the biosynthesis of murideoxycholic acid (MDCA)
- 3D 24XI: Crystal structure of the diaminopimelate dehydrogenase from Pyrococcus sp. in its holo form
- 3D 27LJ: the structure of cis-isoeugenol synthase AtaIGS1 mutant
- 3D 29VD: Crystal structure of the human METTL3-METTL14 in complex with STC-15
- 3D 29VJ: Crystal structure of the human METTL3-METTL14 in complex with STM-2457
- 3D 30EW: XN-IL lectin from Xenorhabdus nematophila in complex with lactose
- 3D 31CJ: Reduced E.coli aerotaxis receptor
- 3D 31CK: Oxidized E.coli aerotaxis receptor in MH-cap free state
- 3D 36IQ: Structure of de novo designed doxorubicin binding protein with doxorubicin bound
- 3D 9OSA: Crystal Strucutre of SwnH1
PDB Photosynthesis
- 3D 27LJ: the structure of cis-isoeugenol synthase AtaIGS1 mutant
- 3D 31CJ: Reduced E.coli aerotaxis receptor
- 3D 31CK: Oxidized E.coli aerotaxis receptor in MH-cap free state
- 3D 9MNC: Human 80S ribosome bound to small molecule SW393071
- 3D 9RKM: Crystal structure of [FeFe]-hydrogenase CbA5H from Clostridium beijerinckii in Hinact state
- 3D 9SDD: Crystal structure of ERb-ERc heterodimer from Schizochytrium sp.
- 3D 9SRP: Structure of the Diels-Alderase ChlE3 in complex with cofactor FAD
- 3D 9TN7: F420-nitrite reductase from Methanocaldococcus infernus at 1.58 A resolution
- 3D 9YGM: Babesia divergens ribosome structure by single-particle cryo-EM (3D class3, E-site tRNA)
- 3D 9YXB: Babesia divergens ribosome structure by single-particle cryo-EM (3D class1, A-, P-, and E-site tRNAs and mRNA)
PDB PFAS Degradation
- 3D 9HLN: Crystal structure of MnmA D100C mutant from Streptococcus pneumoniae with [4Fe-4S] cluster in complex with formate
- 3D 9RFP: Peptidedeformylase XisD in complex with formiate
- 3D 9Q1E: Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
- 3D 9Q6O: Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
- 3D 9VBQ: Crystal structure of FXR in complex with agonist XJ02862-S2
- 3D 9VBR: Farnesoid X Receptor Agonists_FXR fused with a HD3 peptide
- 3D 9ZLK: Cryo-EM structure of MgtA with bound AMPPCP and magnesium
- 3D 24UU: Crystal structure of Endonuclease IV from Chlamydophila pneumoniae
- 3D 9Z11: Crystal Structure of the Poly(Hexamethylene Adipamide) (Nylon66) Hydrolase Nyl50 in Complex with Butyrate at Room Temperature
- 3D 24HR: Human KRAS G12D (GDP-bound) in complex with macrocyclic peptide inhibitor AP6252
Project Gutenberg
- The Masque of the Red Death EPUB PDF
- The Republic EPUB PDF
- The Yellow Wallpaper EPUB PDF
- A Modest Proposal EPUB PDF
- Meditations EPUB PDF
- The Hound of the Baskervilles EPUB PDF
- Second Treatise of Government EPUB PDF
- The Republic EPUB PDF
- The Souls of Black Folk EPUB PDF
- The Complete Works of Shakespeare EPUB PDF
- The Time Machine EPUB PDF
- White Fang EPUB PDF
- Walden EPUB PDF
- Hamlet EPUB PDF
- Notes from the Underground EPUB PDF
GitHub bioRxiv
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evo-design/proto-tools
57
Python
A universal infrastructure layer for generative biology
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anthropics/knowledge-work-plugins
22047
Python
Open source repository of plugins primarily intended for knowledge workers to us...
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move37-labs/nucleobench
27
Python
Repository for "NucleoBench: A Large-Scale Benchmark of Neural Nucleic Acid Desi...
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aidenkoloj/CIRPIN
6
Jupyter Notebook
Source code for CIRPIN: Learning Circular Permutation-Invariant Representations ...
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haddocking/haddock3
251
Python
Official repo of the modular BioExcel version of HADDOCK
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AAKoksoy/TLS-Finder
12
Jupyter Notebook
An algorithm in Python that locates the TLS and lymphoid aggregates in tissues u...
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Synthyra/FastPLMs
45
Python
Easy to use and efficient implementations of Protein Language Models
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styx-api/niwrap
27
Python
Modern Neuroimaging Made Simple
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grobidOrg/grobid
4960
Java
A machine learning software for extracting information from scholarly documents
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jhuapl-bio/taxtriage
75
JavaScript
TaxTriage is a Nextflow workflow designed to agnostically identify and classify ...
Synthetic Biology
- Predicted Functional Potentials of Bacterial Communities in Fermented Maize Products From Ghana, Nigeria, and Benin via 16S rRNA Amplicon Sequencing and PICRUSt2.
- Identification of candidate genes involved in root gall formation during early infection of Plasmodiophora brassicae in B.napus.
- Dual modulation of toxic risks and functional benefits: How traditional practices enable safe consumption of toxic Rhododendron decorum Franch. in ethnic cuisine.
- Identification and analysis of the AP2/ERF gene family in Dendrobium officinale based on pan-genome and functional characterization of DofERF109_2.
- Correction: Transcriptome-based analysis of oil accumulation pattern and key gene screening in Gardenia jasminoides fruits.
- From Phytochemistry to Drug Discovery: A Systematic Review of Multitarget Pharmacology and Lead Compound Prioritization of Piper crocatum Ruiz & Pav.
- Investigation of the essential role of capsular polysaccharide in serotype 1 Streptococcus pneumoniae.
- Altered GABA and secondary bile acids in Guillain-Barré syndrome: association with gut dysbiosis.
- Charting the Biosynthetic Landscape of Hybrid Polyketide-Nonribosomal Peptide-Specialized Lipids.
- 3‑Methylthiopropionic Acid Kills Carbapenem-Resistant Klebsiella pneumoniae by Disrupting Membrane Integrity and Bioenergetics.
- Sulfation in the Biosynthesis of the Heptadecaglycoside Antibiotic Saccharomicin A.
- Deciphering flavonoids and terpenoids biosynthesis through chromosomal-level genome, metabolome, and transcriptome integration in Spuriopimpinella brachycarpa.
- Evolution and diversification of PAL-mediated salicylic acid biosynthesis in Rosaceae.
- Integrated multi-omics analysis reveals the molecular mechanism underlying poplar 107 rootstock-mediated regulation of Populus tomentosa scion growth.
- Cooperativity in microbial biotechnology: synthetic consortia as emerging metabolic engineering strategy for sustainable bioproduction.
Biotechnology
- GLP-1 Gene Therapy Trial for Obesity and Type 2 Diabetes: Towards a New Paradigm for Chronic Disease Treatment.
- Deciphering interferon functions in avian influenza using receptor knockout models in the natural host.
- Violet teaming as a resilient framework for bridging civilian-military electronic health record interoperability.
- Cis-regulatory elements in CAMTA-mediated stress signalling: mechanisms and prospects for CRISPR-based crop improvement.
- Genetic disruption of Capns1 impairs metastatic phenotypes in murine mammary carcinoma cells.
- Therapeutic frontiers in ALS: iPSC-based drug discovery, cell therapy, and gene therapy-Advances through 2026.
- Identification of G4-regulated immune-related drug targets for prostate cancer based on G4 screen and machine learning.
- Exploring the Role of CD44 in the Progression and Invasion of Chondrosarcoma.
- Clostridiaceae in Cancer Management.
- Simultaneous Dual-Gene Detection of Escherichia coli O157:H7 Based on a CRISPR/Cas13-Mediated Biosensor.
- Disease and Participant-Related Correlates of Genetic Testing Completion for Hereditary Eye Disorders in a Cohort of over 1400 Patients.
- Catcher Domains as Multifunctional Fusion Modules for Soluble Expression, Covalent Coupling, and Spatial Organization of Recombinant Proteins.
- A small-scale CRISPR mutant library in rapeseed of commercial cultivar Zhongshuang 11.
- Epigenetic orchestration of sugar signaling in plant development and stress adaptation.
- Cooperativity in microbial biotechnology: synthetic consortia as emerging metabolic engineering strategy for sustainable bioproduction.
AI & Machine Learning
- EEG Revisited-Neuronal, Glial, and Network Mechanisms Across Scales.
- Prediction of diffusion coefficients in mixtures with tensor completion.
- Quantitative EEG Analyses for Outcome Prediction in Comatose Patients After Cardiac Arrest.
- Thermally activated defect tolerance of the oxygen vacancies in CeO(2) revealed by machine-learning molecular dynamics.
- Reactive machine-learned potentials for fluoropolymer binders: unified physical and chemical property validation.
- Machine Learning Algorithms to Accelerate Etiological Diagnosis of Congenital Disorders of Adrenal Steroidogenesis.
- Diversity of Iodinated Water Disinfection Byproducts and Their Formation Dynamics Discovered Using Exposome-Scale Nontargeted Analysis and Machine Learning.
- Comparative Evaluation of ChatGPT-5.4 Mini and Gemini 3 Flash in Scar Patient Education: Quality, Reliability, and Readability Analysis.
- Machine learning prediction of axillary lymph node metastasis using multimodal ultrasound in breast cancer.
- Regulating AI Chatbot Impersonations of Medical Professionals.
- Correction: Explainable gradient convolutional vector fuzzy pattern analysis based on ensemble model for facial expression recognition.
- Violet teaming as a resilient framework for bridging civilian-military electronic health record interoperability.
- ChatGPT in healthcare: perceptions, ethical considerations, and practice implications among healthcare professionals in Ecuador and other countries in the Americas: a cross-sectional survey study.
- Dynamic consent framework for low-dose CT scan lung cancer screening: autonomy, privacy, ethical data management.
- Ensemble based in transfer learning for cytological classification in pleural fluid.
Neuroscience
- Cost-Effectiveness of EEG Monitoring in Hypoxic-Ischemic Brain Injury After Cardiac Arrest.
- Pathophysiology and Prognostic Significance of Myoclonus in Hypoxic-Ischemic Encephalopathy.
- EEG Revisited-Neuronal, Glial, and Network Mechanisms Across Scales.
- Fascial Mild Urethral Sling or Artificial Urinary Sphincter in the Neurological Women Population, a Multicenter Study.
- Genomic drivers of brain metastases in lung cancer.
- Neurophotonics book club: "The Secret of Secrets" by Dan Brown - a thought-provoking twist on a famous neuroscience controversy.
- Systemic TGF-β1 reduction contributes to neuronal GLUT4 trafficking impairment in acute hepatic encephalopathy.
- Acupuncture modulates the microbiota-gut-brain axis to treat irritable bowel syndrome: a mechanistic exploration.
- Predicting early neurological deterioration in acute branch atheromatous disease without reperfusion therapy: a machine learning model.
- Microchannel-assisted precision surgical treatment for thoracic ossification of the ligamentum flavum: a comparative retrospective study.
- Adaptive signal theory: an integrative evolutionary, ecological, and intergenerational framework for psychological distress.
- The human GABA (A) receptor α4 subunit variant Ile114Asn linked to epilepsy impairs membrane expression with β3 and δ subunits.
- Heart rate variability findings in neurological decompression sickness: an exploratory case series.
- Resting State Networks and Their Associations with Cognitive Functions in Traumatic Brain Injury: An Integrative Review.
- The Clinical and Biological Characterization of Triple A Syndrome (Allgrove Syndrome) in 12 Pediatric Patients.
Climate Science
- EAACI Guidelines on Environmental Science for Allergy and Asthma-Evidence-Based Recommendations for Prevention and Public Health Action to Mitigate the Impact of Pollen Exposure on Respiratory Allergy.
- The First Functional Traits Dataset for the Endemic Flora of Greece: morphology, ecology and ecosystem services.
- Cis-regulatory elements in CAMTA-mediated stress signalling: mechanisms and prospects for CRISPR-based crop improvement.
- Diurnal asymmetric warming promotes the growth of the perennial species Sophora alopecuroides in a temperate arid region of China.
- Trends and Epidemiological Profile of Climate-Related Disasters in Spain between 1950 and 2024.
- Cobalt nanoparticles protect against endocrine disruption in response to multiple abiotic stresses in fish.
- Topic: boron toxicity in semi-arid crops: the overlooked metalloid in abiotic stress.
- Primed acclimation of two Greek olive cultivars to water deficit.
- Integrating Remote Sensing and Machine Learning to Project Global Habitat Suitability and Productivity of Chinese Fir Under Climate Change.
- Symbiotic soil fungi mitigate nitrogen-driven methane emissions in an experimental grassland.
- Assessing the adaptive profiles and thermal comfort status of Hararghe Highland sheep through physiological parameters.
- [Managing mixed forest stands : bridging the gap between silviculture and ecological theory].
- Trade-off strategies between seed regeneration and sprout regeneration in forest trees under global change: A review.
- Distribution of Azadinium spinosum in Chinese coastal waters and its response to climate change.
- Classification and occurrence characteristics of regional atmospheric heatwaves in North China and its marginal seas.
Medicine
- Neurophysiology in Postanoxic Encephalopathy: Pathophysiology, Prognosis, and Treatment.
- Rhythmic and Periodic Patterns and Seizures in Hypoxic-Ischemic Encephalopathy.
- Neuroprotective Treatment of Postanoxic Encephalopathy: Review of the Literature and Ongoing Trials.
- Principles of Management of Postcardiac Arrest Patients in the ICU.
- SEEG Implantation for Opercular Epilepsies.
- Proteostasis is disrupted in human endothelial cells by serum from ATTR patients and is rescued by tafamidis treatment.
- Sulforaphane attenuates cisplatin‑induced acute kidney injury by inhibiting oxidative stress, inflammation and apoptosis via regulation of NRF2.
- [Treatment adherence as a clinical challenge in the curative treatment of breast cancer.].
- Targeting the PI3K/AKT pathway in prostate cancer: the role of PTEN deficiency and biomarker-guided therapy.
- Computational Simulation and Experimental Validation of Electric Field Distribution Patterns in TTFields Therapy for Lung Cancer.
- GLP-1 Gene Therapy Trial for Obesity and Type 2 Diabetes: Towards a New Paradigm for Chronic Disease Treatment.
- Expert Opinion: Restrictions, Precautions, or Normalcy? Defining Everyday Risk in Patients Treated With IL-1 Blockers for Recurrent Pericarditis.
- The Therapeutic Role of Exercise in Diabetic Cardiomyopathy: Underlying Mechanisms and Interactions with Antidiabetic Medications.
- Targeting the HMGB1 Pathway With Glycyrrhizic Acid and Amlexanox Attenuates RSV-Induced Injury and Viral Propagation.
- Dordaviprone Maintenance After Allogeneic HCT for High-Risk Acute Myeloid Leukemia and Myelodysplastic Neoplasm.
Genomics
- Whole Genome Sequencing and Genetic Variation Analysis of Parry-Romberg Syndrome.
- Comparative mitochondrial genomics of cultivated Sesamum indicum and its wild relative Sesamum schinzianum provides insights into structural features and organellar evolution.
- Case Report: Exceptional longevity in turner syndrome.
- ERGA-BGE reference genome of Gambusia holbrooki, a globally invasive freshwater fish.
- Molecular characterisation of extended-Spectrum-Beta-lactamase-producing Klebsiella pneumoniae among children and chicken in the rural Korogwe District, Tanzania.
- Integrated single-cell and spatial transcriptomics reveal immune landscape and NKT-Th1 signatures in colorectal cancer.
- Molecular and spatial specialization of lung interstitial macrophage subsets: beyond chemokines.
- Cytotoxic lymphocyte heterogeneity in glioblastoma: insights from single-cell and spatial multiomics toward precision immunotherapeutic reprogramming.
- Correction: Transcriptomic and bioinformatics analysis reveals the host response feature and potential treatment strategy of patients with dengue fever.
- Germinal Center-Like Tertiary Lymphoid Structures Mark Immune Responsiveness and Enable Checkpoint Immunotherapy in Bladder Cancer.
- Integrative Analysis of Glycosylation-Related Genes Reveals Prognostic Subtypes, Immune Evasion, and Therapeutic Vulnerabilities in Lung Adenocarcinoma.
- Prognostic Value of Spatial and Topological Features of Tumor Microenvironment in Classic Hodgkin Lymphoma.
- Genome-wide copy number variation drives adaptive evolution in Macaca mulatta populations.
- 3‑Methylthiopropionic Acid Kills Carbapenem-Resistant Klebsiella pneumoniae by Disrupting Membrane Integrity and Bioenergetics.
- Sudden re-emergence of Streptococcus pyogenes subtype emm3.93 in Spain, 2023-2024.
Immunology
- Spatial Tail Design in Ionizable Lipids Enhances the Safety and Efficacy of mRNA Delivery.
- Correction: A microfluidic approach to evaluating surface protection from nonspecific antibody adsorption.
- Deciphering interferon functions in avian influenza using receptor knockout models in the natural host.
- Durability Benchmarking of Contemporary Second-Line and Later Therapies for Relapsed or Refractory Follicular Lymphoma Using Reconstructed Individual Patient Data From Published Kaplan-Meier Curves.
- Efficacy of Bispecific Antibodies in Relapsed or Refractory Multiple Myeloma With Extramedullary Disease: A Systematic Review and Meta-Analysis.
- CCL17-neutralizing and esterase-responsive core-shell microgels for endogenous Tregs recruitment and functional enhancement in myocardial infarction.
- Metabolic rewiring of the tumor microenvironment: therapeutic intervention of multi-pathway adaptations to impede cancer metastasis.
- Nociceptor activity is required for a robust immune response in Drosophila larvae.
- Toward Precision Bioconjugation: Chemical Strategies for Site-Selective Cysteine Conjugation.
- Investigation of the essential role of capsular polysaccharide in serotype 1 Streptococcus pneumoniae.
- Appendectomy and colorectal cancer: a mini review from the perspective of gut microbiota and mucosal immunity.
- Cytokine-induced chromatin accessibility in whole blood neutrophils links to sepsis transcriptional states.
- Immune drivers of venous thrombosis: orchestrating initiation, formation, and resolution within the hypoxic microenvironment.
- Inhibitory impact of A1 and A2 cow's milk on human peripheral blood mononuclear cells identifies TOM1 as a candidate anti-inflammatory mediator.
- The enigma of inverted lymph node architecture in pigs: insights into immune function and vaccination design.
Microbiology
- Cardiovascular Adverse Events Associated with Immune Checkpoint Inhibitors from the Perspective of Gut Microecology: Potential Roles and Research Advances of the Gut Microbiota.
- Dermatophilosis among men who have sex with men, Stockholm, Sweden, March to June, 2026.
- FTIR-ATR Spectroscopy as a Tool to Differentiate Listeria monocytogenes by Geno-Serogroups, Growth Conditions and Persistence Status.
- Identification of candidate genes involved in root gall formation during early infection of Plasmodiophora brassicae in B.napus.
- Integration of the serum metabolome and gut microbiome underscores the importance of altered lipid metabolism and potential immune modulation in Parkinson's Disease.
- Modified string test to improve and confirm by molecular characterization for bacterial identification.
- Metagenomics next-generation sequencing of plasma combined with blood cells for improving the prognosis of early infection in patients with hematologic disorders: a real-world cohort study in northern China.
- Non-O1/Non-O139 Vibrio cholerae Bacteremia Presenting as Spontaneous Bacterial Peritonitis in Decompensated Cirrhosis: A Case Report.
- Neonatal Bacteremia Caused by Herbaspirillum huttiense in a Neonatal Intensive Care Unit: A Case Series.
- Detection of zoonotic protozoa in raccoons (Procyon lotor) from aquaculture zones in Saxony (Germany): One health perspective.
- Viral pathogens in urban rats: A one health systematic review of global surveillance evidence.
- Application and efficacy evaluation of a novel electrolytic water-disinfecting toilet for infection prevention and control in healthcare facility restrooms.
- Epidemiology, Antifungal Susceptibility, and in-Hospital Mortality of Candidemia in a Tertiary Hospital of China: A 10-Year Retrospective Analysis.
- Purulent Pericarditis Caused by Polymicrobial Periodontal Pathogens (Tannerella forsythia, Fusobacterium nucleatum, and Porphyromonas gingivalis): A Case Report and Literature Review.
- Evaluation of electroacupuncture acupoint selection's potential in the treatment of inflammatory bowel disease: an investigation using a mouse gut microbiome and metabolomics model.
Evolutionary Biology
- Site-resolved exploration of high-entropy alloy hydrogen evolution reaction catalysts via interpretable modelling and high-throughput density functional theory.
- The Evolution and Validation of Thyroid Cancer Guidelines as Evidence Advances Toward Individualized Therapy.
- Phylogenomic conflict and reticulate evolution during radiative diversification of the genus Rheum.
- Comparative mitochondrial genomics of cultivated Sesamum indicum and its wild relative Sesamum schinzianum provides insights into structural features and organellar evolution.
- Evolution of China's industry-university-research-hospital collaboration in AI medical devices and implications for medical institutions and public health governance.
- Genome-wide copy number variation drives adaptive evolution in Macaca mulatta populations.
- Evolution of advanced revascularization strategies for high-risk pulmonary embolism: a physiology-guided single-center experience.
- From randomness to recognition: modeling the evolution of DNA sequence information during enrichment for binding.
- Evolution and diversification of PAL-mediated salicylic acid biosynthesis in Rosaceae.
- Research advances in physical activity and insomnia: a bibliometric and thematic evolution analysis.
- Pd-Modified Metal Organic Frameworks Synthesized via Mechanochemical Extrusion: Versatile Materials for Suzuki-Miyaura Cross-Coupling and Electrochemical Hydrogen Evolution Reaction.
- Precise modulation of atomic surface arrangement in high-entropy alloys for oxygen evolution.
- Evolution of the humanitarian roster system for sexual and reproductive health.
- Phylogeny of SK channels and functional characterization of the conserved Phe in the S3-S4 loop.
- One Health Genomic Surveillance at Human-Animal Interfaces in Rural Ghana Reveals Underreported Viruses of Zoonotic and Economic Concern.
Molecular Ecology
- The First Functional Traits Dataset for the Endemic Flora of Greece: morphology, ecology and ecosystem services.
- Environmental drivers of Odonate assemblages across biogeographic provinces in the Mexican Transition Zone.
- ERGA-BGE reference genome of Gambusia holbrooki, a globally invasive freshwater fish.
- Fauna of Louse Flies (Hippoboscidae) from Scops Owls (Otus: Strigidae) of the Nansei Islands, Japan, with Information on Their Phylogenetic Positions and Population Structure.
- Altitudinal Distribution of Fireflies (Coleoptera: Lampyridae) in the Tacaná Volcano, Mexico.
- Genome-wide copy number variation drives adaptive evolution in Macaca mulatta populations.
- pygenoscape: a Python package for spatial interpolation and visualization of genetic distance landscapes.
- Effects of Climate and Water Limitation on Reproductive Traits and Trait Divergence Across Soil Boundaries in a Serpentine-Tolerant Annual Herb.
- Studies on seed-borne fungi, Aspergillus diversity, and their detection using beta-tubulin gene sequences in Foeniculum vulgare seeds in India.
- From fungal diversity to antimicrobial innovation: the potential of biotransformation in the era of resistance.
- Human hunters are no substitute for vanishing apex predators.
- Structure and niche characteristics of dominant species of Madhuca hainanensis communities in different distribution areas.
- Toxicological Effects of Phthalate Plasticizers in Zebrafish Models: A Review.
- Exploring Copaiba and Andiroba Oils: A Comprehensive Review of Composition, Physicochemical Properties and Pharmacological Activities in Advanced Delivery Systems.
- Plant Diversity and Abundance Response to the Effects of Soil Properties and Growth Forms in Grasslands.
arXiv Physics
- PDF Accessing both electrochemical SEIRA and SERS with ultrasensitive metamaterials for enhanced molecular identification
- PDF 3D Imaging of Complex Skyrmion and Hopf Topologies in an Extended Sample
- PDF Unpinning of trapped oil droplets via non-resonant acoustic streaming in capillary tubes
- PDF Weak-Flow Induced Dielectric Axes Rotation in Dipolar Suspensions
- PDF Sparse Sensor Placement for Reducing Forecast Errors in Ensemble Kalman Filtering
- PDF Ion firehose and ion cyclotron instability with subtracted-Kappa distributions
- PDF Quantum computer architecture with ions in tweezer arrays
- PDF Modular molecular toolkit for photochemical energy conversion in a self-assembling nanocontainer
- PDF A hardware-safety-gated system for LLM-written native ARTIQ control code on a trapped-ion platform
- PDF Plasmonic coated scatterers for tunable coherent perfect absorption
- PDF Organic Semiconductor Alignment via Confinement in Vapor-Guided Droplets
- PDF Real Quantum Chemistry With Complex Orbitals
- PDF On the Effects of Decentralized Moderation on Network Robustness and Information Diffusion in Mastodon
- PDF Unraveling Internal Friction in a Coarse-Grained Protein Model
- PDF Kolmogorov Arnold networks (KAN) for aerodynamic prediction: a comparison with MLPs and GNNs
arXiv Mathematics
- PDF $\mathrm{W}^*$-algebraic Integration Theory
- PDF The Effect of Topological Defects and Magnetic Flux on Fully-Heavy Tetraquarks and Mass Spectra of Heavy Quarkonia Using the Analytical Exact Iteration Method
- PDF Hall Geometry and Auslander-Reiten Quiver
- PDF Typical distances in high-genus triangulations
- PDF Error-Conditioned Neural Solvers
- PDF Congruent copies of finite patterns in planar point sets
- PDF All you need is log
- PDF Coquasi-bialgebroids and cocycle twisting
- PDF On the deformation theory of chiral quantizations
- PDF Godbillon-Vey classes of Lie subalgebroids
- PDF Exact subsystem dynamics in the deterministic Floquet-PXP model
- PDF Classification of homogeneous almost complex $4$-manifolds with non-degenerate torsion bundle
- PDF Valuing American options and Flexible Forwards contracts in time-dependent models
- PDF A Precompactness theorem for Einstein metrics on homogeneous torus bundles
- PDF On the homology groups of clique complexes of strongly regular graphs
arXiv Computer Science
- PDF DanceOPD: On-Policy Generative Field Distillation
- PDF Ask, Solve, Generate: Self-Evolving Unified Multimodal Understanding and Generation via Self-Consistency Rewards
- PDF Scalable Behavior Cloning with Open Data, Training, and Evaluation
- PDF World Action Models Enable Continual Imitation Learning with Recurrent Generative Replays
- PDF Paying More Attention to Visual Tokens in Self-Evolving Large Multimodal Models
- PDF DnA: Denoising Attention for Visual Tasks
- PDF Don't Settle at the Mode! Mitigating Diversity Collapse in Pretrained Flow Models via Feature Self-Guidance
- PDF Reinforcement Learning without Ground-Truth Solutions can Improve LLMs
- PDF PhysiFormer: Learning to Simulate Mechanics in World Space
- PDF Autoregressive Boltzmann Generators
- PDF When are likely answers right? On Sequence Probability and Correctness in LLMs
- PDF RouterVLA: Turning Smoke Tests into Supervision for Heterogeneous VLA Selection
- PDF Error-Conditioned Neural Solvers
- PDF Continual Robot Policy Learning via Variational Neural Dynamics
- PDF CHIA: An open-source framework for principled, agentic AI-driven hardware/software co-design research
arXiv Quantitative Biology
- PDF Deep learning model emulators for marine biogeochemistry forecasting from days to decades
- PDF Hyperiax and Phylogenetic Inference from Shape Data
- PDF The parental parsimony problem on binary, tree-child phylogenetic networks
- PDF Surviving by Serving: Functional Relevance Drives Self-Organization in Complex Adaptive Systems
- PDF State-Specific Respiratory Signatures for Affective and Stress Recognition: Interpretable Respiratory Markers, Autocorrelation Lags, and Compact CNN Models
- PDF On-farm management strategies for reducing H5N1 transmission in dairy cattle
- PDF Semialgebraic Conditions for Identifying Triangles in Phylogenetic Networks
- PDF pVACtools v6: A comprehensive suite for neoantigen prediction, visualization, and therapy design
- PDF Budget-Constrained Compound Library Prioritization with Risk Awareness and Uncertainty Quantification
- PDF Shape-Constrained Bayesian Active Learning of Self-Limiting Saturation Curves
- PDF scBench-Long: Verifiable Benchmarking of Long-Horizon Single-Cell Biology
- PDF GRAINS: Storage-Aware Algorithm-Architecture Co-Design Enabling High-Performance and Low-Cost Graph-Based Genome Analysis
- PDF Closing the Loop to Discover Psychological Theories with an Automated Cognitive Scientist
- PDF Frustrated shapes of solid domains in fluid membrane vesicles: From rolls and folds to crumples and wrinkles
- PDF Smoothly Time-Varying Continuous Time Markov Chains in Phylogenetics
arXiv Quantitative Finance
- PDF Valuing American options and Flexible Forwards contracts in time-dependent models
- PDF Endogenous Reinsurance Pricing in Large Competitive Insurance Markets: Finite-Player and Mean Field Analysis
- PDF Pretrained Time-Series Foundation Models for Financial Return Forecasting
- PDF Conditional Leibniz Derivative Estimation with an Application to American Call Min-Options
- PDF A sharp order-three obstruction to the aggregation of conditional price-of-risk attribution
- PDF Data-Driven Duration Management -- Term Structure Forecasting Using Machine Learning
- PDF Robust Hedging Valuation Adjustment under Liquidity--Demand Stress
- PDF Portfolio Optimization for Commodity ETFs under Heavy-Tailed Returns
- PDF Geometrically convex return risk measures on AM-algebras
- PDF Matrix Approximation of Bachelier Option Prices and Greeks under Stochastic Volatility models
- PDF The Inference-Compute Frontier and a Latency-Efficient Architecture for Limit Order Book Prediction
- PDF Hierarchical Graph Learning for Calendar Spread Strategies in Commodity Futures Markets
- PDF A Two-Stage Decision Support System for Sustainability-Aware Long Short Portfolio Optimization
- PDF Time-dependent weighted directed networks of cryptocurrency interaction from high-frequency returns
- PDF Equilibrium singular dividend control under ambiguity aggregation of heterogeneous discount rates