Protein Data Bank
- 3D 10BT: X-ray Crystal Structure of A High-Affinity Monoclonal Antibody Sequesters Xylazine
- 3D 10PI: JAK1 kinase (JH1 domain) in complex with povorcitinib
- 3D 10PJ: JAK2 kinase (JH1 domain) in complex with povorcitinib
- 3D 10QM: E.coli 50S ribosomal subunit bound to compound 48a
- 3D 10RI: Dimeric complex of VEGF, VEGFR2 and Neuropilin 1
- 3D 10RJ: Heparin-induced cis tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
- 3D 10RK: Heparin-induced trans tetrameric complex of VEGF, VEGFR2 and Neuropilin 1
- 3D 10YZ: Crystal structure of mouse DXO in complex with pGGGUU RNA and two magnesium ions
- 3D 11AO: Crystal structure of mouse DXO in complex with the oligonucleotide pA5 with 5'phosphate in the product and substrate states
- 3D 11AP: Crystal structure of mouse DXO in complex with the UDP-N-acetylglucosamine cap
PDB Nitrogen Cycle
- 3D 13LD: Deuterated alanine racemase from Geobacillus stearothermophilus
- 3D 21HO: Crystal strucrue of HuHF-C2-MEO complex
- 3D 9LOK: The co-crystal structure of PTP1B complex with allosteric inhibitor Fumosorinone
- 3D 9LP5: The crystal structure of human PTP1B
- 3D 9NS8: Crystal Structure of Side-VI IG1 Domain
- 3D 9PN1: Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with 15-cis-retinal
- 3D 9S39: Serial crystallography structure of a photosynthetic reaction center using a goniometer-compatible 96-well chip-based platform
- 3D 9T0V: Crystal structure of H416C NikA mutant from Escherichia coli in complex with Fe(III)-EDTA
- 3D 9T5T: Chlorophyll f-containing dimeric far-red Photosystem II from Chroococcidiopsis thermalis PCC 7203
- 3D 9VBQ: Crystal structure of FXR in complex with agonist XJ02862-S2
PDB Photosynthesis
- 3D 10QM: E.coli 50S ribosomal subunit bound to compound 48a
- 3D 28LN: XBP1u-stalled RPL4 RNC in complex with NAC
- 3D 9S39: Serial crystallography structure of a photosynthetic reaction center using a goniometer-compatible 96-well chip-based platform
- 3D 9SCU: Cryo-EM structure of the Arabidopsis thaliana 60S ribosomal subunit
- 3D 9T5T: Chlorophyll f-containing dimeric far-red Photosystem II from Chroococcidiopsis thermalis PCC 7203
- 3D 9T5U: Chlorophyll f-containing monomeric far-red Photosystem II from Calothrix sp. NIES-3974
- 3D 9Y79: Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-t...
- 3D 9R9Q: [FeFe]-hydrogenase from Nitratidesulfovibrio vulgaris str. Hildenborough at pH 5.04
- 3D 9R9R: [FeFe]-hydrogenase from Nitratidesulfovibrio vulgaris str. Hildenborough at pH 5.21
- 3D 9R9S: [FeFe]-hydrogenase from Nitratidesulfovibrio vulgaris str. Hildenborough at pH 5.45
PDB PFAS Degradation
- 3D 9Q1E: Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
- 3D 9Q6O: Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
- 3D 9VBQ: Crystal structure of FXR in complex with agonist XJ02862-S2
- 3D 9VBR: Farnesoid X Receptor Agonists_FXR fused with a HD3 peptide
- 3D 9ZLK: Cryo-EM structure of MgtA with bound AMPPCP and magnesium
- 3D 24UU: Crystal structure of Endonuclease IV from Chlamydophila pneumoniae
- 3D 9Z11: Crystal Structure of the Poly(Hexamethylene Adipamide) (Nylon66) Hydrolase Nyl50 in Complex with Butyrate at Room Temperature
- 3D 24HR: Human KRAS G12D (GDP-bound) in complex with macrocyclic peptide inhibitor AP6252
- 3D 24RC: Cryo-EM structure of human sodium pump W931R mutant in K+-occluded E2-Pi state
- 3D 9RBN: Structure of an ancestral bifunctional dehalogenase-luciferase enzyme Anc238Loc, space group C121
Project Gutenberg
- Anthem EPUB PDF
- The Bible, King James Version EPUB PDF
- Treasure Island EPUB PDF
- A Tale of Two Cities EPUB PDF
- Pygmalion EPUB PDF
- Siddhartha EPUB PDF
- A Princess of Mars EPUB PDF
- The Invisible Man EPUB PDF
- Great Expectations EPUB PDF
- Crime and Punishment EPUB PDF
- Flatland EPUB PDF
- The Fall of the House of Usher EPUB PDF
- The Divine Comedy EPUB PDF
- Second Treatise of Government EPUB PDF
- The Souls of Black Folk EPUB PDF
GitHub bioRxiv
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RosettaCommons/foundry
846
Python
Central repository for biomolecular foundation models with shared trainers and p...
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flyark/LIVIA
17
HTML
LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize pro...
-
NeurosnapInc/Prot2Prop
11
Python
Structure-aware fine-tuning of protein language models for joint prediction of m...
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fantom-prj/SALA
7
Perl
The transcript Start-site Aware Long-read Assembler (SALA) was developed for de ...
-
RosettaCommons/atomworks
426
Python
A generalized computational framework for biomolecular modeling.
-
anthropics/knowledge-work-plugins
19920
Python
Open source repository of plugins primarily intended for knowledge workers to us...
-
prescient-design/lobster
163
Python
Lbster: Language models for Biological Sequence Transformation and Evolutionary ...
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hanjinliu/cylindra
17
Python
Fourier analysis and subtomogram averaging of heterogenic cylindrical structures
-
Huang-lab/fastVEP
98
Rust
fastVEP: High-performance Variant Effect Predictor in Rust
-
liaoherui/AccuSNV
8
Python
High-accuracy SNV calling for bacterial isolates using deep learning
Synthetic Biology
- Safe and resource-aware microbial design for food production.
- Arabidopsis enolase2 gene regulates cadmium tolerance via an autoregulatory feedback loop.
- Structure-Based Design and Optimization of Novel PHGDH Inhibitors for Overcoming Erlotinib-Resistant Lung Cancer.
- Engineering Cellobiose Phosphorylase toward Lactose with Its Application to the Biosynthesis of Lacto-N-Biose.
- A fungal natural product that inhibits plant cellulose biosynthesis by disrupting cellulose synthase complexes.
- The impact of fertilization on the health of paddy soil: pathways and prospects for fertility regulation based on microbial communities.
- Virtual screening and molecular dynamics analysis of Plasmodium falciparum dihydroorotate dehydrogenase (DHODH) inhibitors targeting pyrimidine biosynthesis pathway.
- Transcriptomic and proteomic insights into the molecular mechanism underlying cell wall biosynthesis in Moso bamboo (Phyllostachys edulis).
- Synthesis of 4-Aminoindole-Containing Cephalosporin Prodrugs and Their Biological Activity against Mycobacterium tuberculosis.
- Engineering Protein Stability with Small Molecules: A Review of the ecDHFR Destabilizing Domain System.
- Uncovering the Hidden Risks: How PLA and PLGA Microplastics Disrupt Gut Microbiota and Metabolic Health.
- Reshaping of the fecal proteome and metaproteome in obese patients 2 years after bariatric surgery.
- Determination of the peroxisomal proteome of pathogenic stage Histoplasma capsulatum.
- Systemic trade-offs between core and accessory genomes govern stress adaptation in Rhodococcus erythropolis.
- Novel insights into microbial DMSP/DMS cycling: from surface to deep ocean.
Biotechnology
- Inhibition of heat shock protein 90 in the mouse spinal cord enhances opioid antinociception through upregulation of PKCβ in CGRP neurons.
- Arabidopsis enolase2 gene regulates cadmium tolerance via an autoregulatory feedback loop.
- Modular CRISPR-Cas12a-Activated Gold Nanoparticle Assay for Rapid Visual Detection of Hepatocellular Carcinoma-Related miRNAs.
- A fungal natural product that inhibits plant cellulose biosynthesis by disrupting cellulose synthase complexes.
- Estrogen impacts NOD2-dependent regulation of intestinal homeostasis.
- Zasp52 in Drosophila melanogaster indirect flight muscles can serve as a model system to investigate the function of clinical variants causing myopathies.
- Combination S100A1 and ARC gene therapy as a treatment for DMD cardiomyopathy.
- CD8 T-cell activation occurs 24 hours post-AAV administration and is driven by muscle promoter specificity.
- Preliminary revelation of potential therapeutic targets related to ribosome biogenesis in lung adenocarcinoma based on bioinformatics analysis.
- CRISPR-based gene editing for antimicrobial resistance control in human medicine.
- Dual Roles of Voltage-gated Calcium Channels and γ-Aminobutyric Acid-mediated Signaling in Modulating Neurotensin Receptor Type 2-induced Antinociception.
- PRMT1 drives cervical cancer progression by orchestrating cell growth, migration, and angiogenesis.
- Distinct and shared impacts of virulence plasmids on the phenotype and transcriptome in convergent carbapenem-resistant and hypervirulent Klebsiella pneumoniae.
- The cholesterol transporter Niemann-Pick C1 facilitates the entry of porcine epidemic diarrhea coronavirus.
- Application of centromeric fluorescence in situ hybridization probes for embryological and cell studies-A practical approach to validate chromosome stability in Bovinae.
AI & Machine Learning
- Age-stratified risk profiles for emergency colorectal cancer resection: A machine-learning analysis.
- Self-tuned healthy homogeneous core: Addressing heterogeneities in biomedical datasets.
- Visual mapping of muscle MRI fatty replacement patterns in genetic myopathies using dimensionality reduction.
- Agreement between expert gynecologists and ChatGPT in the management of suspected retained products of conception.
- Artificial Intelligence in Interventional Pain: Can ChatGPT Match Fellowship-Level Expertise?: A Comparative Analysis of Accuracy and Readability.
- Circulating Amino Acid Network Remodeling Reveals Systemic Metabolic Reprogramming Predictive of Colorectal Cancer Recurrence and Metastasis.
- Accurately Deciphering Tissue Heterogeneity From Spatial Multi-Modal and Multi-Omics With STransformer.
- Universal Rapid Machine Learning Models for Predicting Unconvoluted and Convoluted X-ray Absorption Spectra.
- The Implementation of a Business Process Model and Notation for Modeling Patient Health Care Trajectories: Systematic Review.
- Prediction of hospitalisation in young children with pneumonia in Malawi: A machine learning-based approach.
- A deep learning-based fusion framework for robust fine-grained classification of sea turtles in support of marine biodiversity.
- Parameter calibration method for car-following models under snowy weather conditions: Integrating an informer time series encoder and physics-informed neural networks.
- A deep neural network and AIS-integrated method for ship trajectory prediction and yaw warning in cross-river power transmission line protection.
- Dynamics of botnet propagation model in complex networks considering hybrid method for botnet detection.
- Fully automated detection of pancreaticobiliary maljunction based on 3D magnetic resonance cholangiopancreatography using deep learning.
Neuroscience
- Effects of non-invasive brain stimulation on gait and corticospinal plasticity in children and adolescents with cerebral palsy: A systematic review.
- The hidden burden of bowel dysfunction in multiple sclerosis: Impact on urinary incontinence, psychological symptoms, fatigue, sleep, and quality of life.
- Intravenous thrombolysis in acute mild non-disabling ischemic stroke: A retrospective cohort study.
- Risk Factors of Chemotherapy-Induced Painful Peripheral Neuropathy: A Retrospective Study from A Single Cancer Center.
- Comparative Effectiveness and Safety of Percutaneous Balloon Compression Versus Conventional Radiofrequency Thermocoagulation for Classic Trigeminal Neuralgia: A Randomized Clinical Trial.
- Exosome-Rich Mesenchymal Stem Cell Secretome Improves Symptoms From Parkinson's Disease: A Case Series.
- Influence of Online Sessions via a Deep Brain Stimulation Device: Prospective, Single-Arm, Longitudinal, Nonrandomized Self-Controlled Cohort Study.
- Pharmacological Inhibition of FKBP51 Mitigates Early Life Adversity-Induced Social Deficits in Male Mice.
- Dietary habits and olfactory function in individuals with Parkinson's disease: an underexplored association.
- A Novel Clinical Classification for Atlantoaxial Dislocation: Based on Surgical Outcomes of 1032 Cases.
- Early mortality risk stratification in childhood bacterial meningitis using cerebrospinal fluid glucose and protein levels and their combinations: A multicontinental cohort study.
- A Clinical and Epidemiological Course Correction in the Management of Unruptured Brain Arteriovenous Malformations.
- Graft-Free ICA-to-ECA Transposition for a Giant Extracranial Carotid Artery Aneurysm in an Infant: A 13-Year Follow-Up Demonstrating Durable Patency and Growth Compatibility.
- Effect of Health Teaching on Knowledge Regarding the Prevention of Zika Virus Infection among Patients Admitted in the Selected Hospital.
- Stronger memories through smarter stimulation.
Climate Science
- Closed-Loop Radiative Cooling Mulch Upcycled From Agricultural Residues for Efficient Soil Heat-Water Stress Mitigation.
- Achieving High-Density and Stress-Resilient Maize Breeding Via Germplasm Innovation.
- Overwinter recovery in perennial crops: Insights from Pierce's disease and related pathosystems.
- Assessing climate change impacts on wildfire risk in central appalachian forests of the Eastern United States.
- Abundant Development of Agaricales Fungi on Livingston Island, Antarctica: Potential Connections to Climate Change.
- Development of predictive models for simulating vegetative and reproductive phenology in European hazelnut trees (Corylus avellana L.).
- Rainfall and minimum temperature modulate the expression of CsβCH and CsCCD1 genes in saffron stigma and improve its quality: comparison of traditional, non-traditional and indoor sites.
- Metabolic Strategies Under Heat Stress in Non-Adapted and High-Temperature-Adapted Lines of a Marine Diatom.
- Integrating Climate Change and Mental Health into Medical Education: A Narrative Review of Interventions and Assessment Tools.
- Effects of temperature on the life-history traits of Myzus persicae and its efficiency in transmitting potato virus Y (PVY) in potato crops.
- Participant experience of a low-carbon, hybrid 'spoke-and-hub', small-format lung health conference.
- Microbial Controls of Primed CO(2) and CH(4) Release From Soils and Sediments Under Warming.
- Climate Change and Musculoskeletal Health: Implications for Rehabilitation Medicine.
- Yellow fever outbreak potential in Djibouti, Somalia and Yemen: a mathematical modelling study.
- Stabilization and solidification of iron ore tailings using alkali-activated geopolymer.
Medicine
- New perspectives on endocrine therapy suitability for hormone receptor-positive metastatic breast cancer in clinical practice.
- The anterior commissure conundrum: A decade of single-institutional experience in the management of congenital laryngeal webs.
- European consensus-based interdisciplinary guideline for invasive cutaneous squamous cell carcinoma: Part 2. Treatment - update 2026.
- Taste preferences and dietary characteristics during complementary feeding according to genetic polymorphisms.
- Real-world clinical characteristics and outcomes in patients with HER2-mutant non-small cell lung cancer (NSCLC) who received second-line treatment: A nationwide database analysis in Japan.
- [Unraveling the Phenotypes of Dyspnea and Leg Discomfort Symptoms During Exercise and Their Clinical Relevance: A Multicenter Real-Life Study in the Andean Region].
- Ganglion Impar Neurolysis Enhances the Short-term Efficacy of Pudendal Nerve Pulsed Radiofrequency Treatment for Pudendal Neuralgia: A Retrospective Cohort Study.
- Effect of Two Doses of Hyaluronidase with Bupivacaine in Ultrasound-Guided Transversus Abdominis Plane Block for Post Cesarean Delivery Pain: A Randomized Trial.
- Comparative Effectiveness and Safety of Percutaneous Balloon Compression Versus Conventional Radiofrequency Thermocoagulation for Classic Trigeminal Neuralgia: A Randomized Clinical Trial.
- Sympathetic and Parasympathetic Ganglion Blocks for Treatment of Long COVID-19 Symptoms: A Scoping Review.
- Effectiveness of Radiofrequency Ablation in Managing Chronic Axial Spinal Pain of Facet Joint Origin: A Systematic Review and Meta-Analysis of Randomized Controlled Trials.
- Peripheral Nerve Stimulation High-Frequency Electromagnetic Coupling Technology to Power an Implanted Neurostimulator With a Separate Receiver for the Treatment of Chronic Knee Pain After Total Knee Arthroplasty: A Retrospective Study.
- Spinal Cord Stimulation and Improved Hand Function in a Traumatic Upper Limb Replantation: A Case Report.
- Temporary Occipital Nerve Peripheral Nerve Stimulation at C2 in Refractory Occipital Pain: Case Series.
- Successful Novel Treatment of Primary Erythromelalgia with Popliteal Sciatic Nerve Block and Peripheral Nerve Stimulation: A Case Report.
Genomics
- Dukan diet, ketogenic diet and low glycemic index diet: Biochemical basis and metabolic consequences.
- Real-world clinical characteristics and outcomes in patients with HER2-mutant non-small cell lung cancer (NSCLC) who received second-line treatment: A nationwide database analysis in Japan.
- Characterization of non-O1 and non-O139 Vibrio cholerae from seafood in Atlantic Canada.
- High resolution spatial transcriptomics identifies insufficient radiofrequency ablation induces hepatocellular carcinoma progression via CEBPD / CXCL2 axis.
- Machine Learning Approaches Using High-Throughput Profiling Data for Antibiotic Discovery.
- Distribution characteristics and genomic epidemiology of carbapenem-resistant Acinetobacter baumannii.
- Graph Contrastive Learning for Inferring Spatial Cell Composition from Integrated Single-cell RNA Sequencing and Spatial Transcriptomics.
- Single-cell spatial transcriptomics of formalin-fixed, paraffin-embedded biopsies reveals colitis-associated cell networks.
- p21-senescent cells drive pancreatic islet dysfunction through targetable paracrine signaling in type 2 diabetes.
- Aberrant STAT signaling and T cell dysregulation define a targetable pediatric sepsis endotype.
- Clinical Rel mutations that increase basal (p)ppGpp promote conjugal transfer of staphylococcal resistance plasmids.
- PSMD4 promotes malignant phenotypes and is associated with angiogenesis-related signaling and immune remodeling in hepatocellular carcinoma.
- CXCL8 Enhances Malignancy of GBM via TNFα-NFκB Mediated Suppression of Ferroptosis.
- ST-LDAW: A Topic-Model and Damped Weighted Least-Squares Method for Integrative Deconvolution of Single-Cell and Spatial Transcriptomics.
- Transcriptomic and proteomic insights into the molecular mechanism underlying cell wall biosynthesis in Moso bamboo (Phyllostachys edulis).
Immunology
- Timing of complementary food introduction is not associated with inflammatory bowel disease risk: A prospective birth cohort study.
- Prevalence of diphtheria and antimicrobial-resistant wound infections among asylum seekers in Heidelberg, Germany, August-October 2024.
- Clinical characteristics and CD4 levels of HIV-infected children seen in referral hospital in Bali, Indonesia: a cross-sectional analytical study.
- A serological survey of hepatitis B among migrant workers at a construction site in Qingdao, China.
- Comparing COVID-19 vaccine effectiveness in Türkiye: heterologous, inactivated, and mRNA vaccines.
- Shared CD4+ T cell receptor specificity groups in Crohn's disease and ulcerative colitis.
- APOL1-risk alleles modulate T-cell receptor signaling to promote allograft rejection.
- Selective expansion of cardiac macrophage subtypes distinguishes their functional roles in disease and homeostasis.
- Aberrant STAT signaling and T cell dysregulation define a targetable pediatric sepsis endotype.
- Regulatory B cells contribute to allergen-encapsulating nanoparticle immunotherapy efficacy for food allergy.
- CD8 T-cell activation occurs 24 hours post-AAV administration and is driven by muscle promoter specificity.
- Women and Myasthenia Gravis.
- The 3'Untranslated region is a critical determinant of Getah virus replication, pathogenesis, and vector competence.
- Antibody-drug conjugates in breast cancer brain and leptomeningeal metastases: mechanistic insights and therapeutic progress.
- Suppression of macrophage membrane cholesterol efflux by SLAMF7-induced IL-7 signaling improves immunotherapy efficacy in hepatocellular carcinoma.
Microbiology
- Evaluating how infectious bursal disease virus influences influenza A virus transmission in chickens.
- MFPD: A Multiple Fungal Pathogen Detection Pipeline Across Diverse Habitats.
- Effects of Lysozyme and Silver Anode Treatment on Pseudomonas aeruginosa Growth and Biofilm Formation in Raw Milk.
- Engineering an Exo70 integrated domain of a barley NLR for improved blast resistance.
- Timing of complementary food introduction is not associated with inflammatory bowel disease risk: A prospective birth cohort study.
- Integrative computational analysis of plant-derived flavonoids as inhibitors of Listeriolysin O and Internalin A in Listeria monocytogenes.
- Reply to González González et al.: The contribution of bacteria to kidney stone formation.
- Etiology of severe acute respiratory infections among adults in northern Thailand using multiplex PCR: A post-COVID-19 surveillance study (2023-2024).
- Higher BMI is associated with vaginal microbiome alterations in women with PCOS.
- Biological characterization of citrus viroid VII.
- Overwinter recovery in perennial crops: Insights from Pierce's disease and related pathosystems.
- Identification, Pathogenicity, and Chemical Control of Nigrospora oryzae, a New Pathogen Causing Mid-Late Soybean Root Rot in Heilongjiang, China.
- A novel double-stranded DNA Badnavirus, prunus gummosis bark splitting virus infecting plum.
- Investigating the population dynamics of Fusarium oxysporum f. sp. eustomae causing stem rot in lisianthus with the PCR-based markers and virulence.
- Inflammation and Chronic Disease: The Mediterranean Diet in Precision and Personalized Nutrition.
Evolutionary Biology
- Theoretical Insights into the Oxygen Evolution Reaction Activity of Monoclinic, Orthorhombic, and Tetragonal Iridium Dioxide Polymorphs.
- Evolution of phenocopying in a dynamical model of developmental trajectories.
- Mechanical properties and energy evolution characteristics of fissure sandstone under the interaction between water and fissures.
- Evolution of clonal hematopoiesis during cancer treatment and its impact on outcomes.
- Virulence Evolution in Host Populations with Heterogeneous Immune Responses: The Weakening of the Uncommon Weak.
- Assembly and analysis of the complete mitochondrial genome of the Bogotá Robber Frog, Pristimantis bogotensis.
- Evolution of Chatbots as an Educational and Supportive Digital Intervention for Family Caregivers of People With Dementia: Protocol for a Systematic Integrative Review.
- Coordination Engineering of Ir─Mo Atomic Pair Sites to Break Scaling Limitations for Acidic Oxygen Evolution.
- Dynamic Evolution-Controlled Parabolic-Shaped Microstructures for Ultra-Black Surface via Self-Assembled Microsphere Mask Etching.
- Reconstruction of Nickel Chalcogenide Induced Ruthenium Nanoparticles Embedding for Oxygen Evolution: Mechanism Switching Enables Enhanced Catalytic Activity.
- Structome-TM: complementing dataset assembly for structural phylogenetics by addressing size-based biases.
- From concept to clinical practice: the evolution of low- and ultra-low-dose triple combination therapy for hypertension.
- Structural Reconstruction and Electronic Microenvironment of Active FeCoNiOOH Support Optimized by Single Mo Atoms for Lattice Oxygen Evolution.
- All About That Base: Dietary Plasticity, Basicranial Flexion and Sphenoid Form.
- The fossil record stays silent: Confusions and conundrums for hominin pelvis evolution.
Molecular Ecology
- Integrating trophic importance into conservation of terrestrial vertebrates.
- A deep learning-based fusion framework for robust fine-grained classification of sea turtles in support of marine biodiversity.
- Free-living fungi in the Anthropocene and impacts on public health, food security, and biodiversity.
- Trade-offs and applications of ecosystem functions in the agro-pastoral ecotone of Western Northeast China.
- A multipurpose medicinal tree under threat: biology, phytochemistry, propagation and conservation of Dillenia pentagyna Roxb.
- polyAdapt: characterizing polygenic adaptive architectures in the presence of strong linkage disequilibrium.
- Mutation rate estimate and population genomic analysis reveals decline of koalas prior to human arrival.
- Revealing Hidden Biodiversity Footprints Embedded in Global Mining Supply Chains.
- Using Metabarcoding Techniques to Map Multiple Dung Beetle-Vertebrate iDNA Networks in a Southeast Asian Forest.
- Transcriptomic genotyping elucidates the population structure and demographic history of the endangered poison frog Oophaga vicentei (Anura: Dendrobatidae).
- Unraveling hidden species diversity of talpid moles using phylogenomics and skull-based deep learning.
- Evidence for resource transfer via common endophyte networks.
- Ethyl acetate extract from Dinizia excelsa Ducke wood: a potential phytotherapeutic agent with antioxidant, cytotoxic and hemolytic (in normal cells), immunomodulatory, antimicrobial, antiparasitic and antitumor activities.
- A non-invasive framework for automated fish monitoring and morphological trait extraction: Implications for ecological monitoring and sustainable fisheries.
- DNA barcoding reveals novel biodiversity in ticks (Acari: Ixodida: Ixodidae) of Ethiopia.
arXiv Physics
- PDF A fast and consistent sharp-interface immersed boundary method for moving bodies of arbitrary thicknes
- PDF Deep learning reveals a stronger fossil fuel influence than biomass burning in shaping remote tropospheric ozone
- PDF Fully-implicit Particle-in-Cell model of a Magnetic Nozzle with electromagnetic power deposition
- PDF RPA as a Hessian Closure: Effective Functionals and Source-Variable Duality Across DFT, LR-TDDFT, 1RDMFT, and MBPT
- PDF Suppressing the Motion of Rydberg Atoms in Inhomogeneous Electric Fields via Stark Echo
- PDF The integral and correlation scales of solar wind turbulence
- PDF A Numerical Experiment on Oscillatory Magnetic Reconnection in a Laboratory Plasma System Driven by Alternating Currents
- PDF Long-term laser frequency stabilization with an FPGA-controlled scanning cavity
- PDF Bi-S network origin of cation-disorder stability and dispersive band edges in AgBiS2
- PDF Parahydrogen Cooling of Nuclear Spin Chains at Hypogeomagnetic Fields
- PDF Ab initio parametrization of distributed polarizable force fields
- PDF Data-driven discovery of governing differential equations across physical systems
- PDF The Map of Parameter Space in Double Microwave Shielding
- PDF Peristaltic Flow in Compressible, Ideal Magnetohydrodynamics: A Mechanism For Solar Spicules
- PDF Revealing Wavelength- and Size-Dependent CO2 Reduction Selectivity via Operando Scanning Photo-Electrochemical Microscopy
arXiv Mathematics
- PDF An Agency-Transferring Model-Free Policy Enhancement Technique
- PDF Weighted universal approximation of differentiable maps on infinite-dimensional manifolds
- PDF A note on large values of Dirichlet $L$-functions for characters of fixed order at $1/2<σ\leq 1$
- PDF PTL-Diffusion: Manifold-Aware Diffusion with Periodic Terminal Laws
- PDF Limit Theory for $N$-Player $α$-Potential Games
- PDF High Mach number limit of the compressible Navier--Stokes equations in critical Besov spaces
- PDF Pathological function spaces and an unsolved Analysis I problem
- PDF On the generalized Turán number of complete bipartite graphs
- PDF Actions, semidirect products and crossed semimodules in the category of small categories with a fixed set of objects
- PDF Finite-n Estimate of Dedekind Numbers by Layer-Ratio Monte Carlo
- PDF Biclique decompositions from Welzl orders
- PDF Mean field games with option to buy information
- PDF On some geometrization of compact metric spaces: A solution to the Banach-Ulam conjecture
- PDF Linear Stability of the Lamb-Chaplygin Dipole
- PDF All-multiplicity monodromy and KLT relations for AdS string integrals
arXiv Computer Science
- PDF Latent Spatial Memory for Video World Models
- PDF MemoryVLA++: Temporal Modeling via Memory and Imagination in Vision-Language-Action Models
- PDF OmniGameArena: A Unified UE5 Benchmark for VLM Game Agents with Improvement Dynamics
- PDF An Agency-Transferring Model-Free Policy Enhancement Technique
- PDF TSseek: Regular Expression-Based Similarity Search for Distributed Time Series Datasets
- PDF Causally Evaluating the Learnability of Formal Language Tasks
- PDF Rethinking the Divergence Regularization in LLM RL
- PDF Weighted universal approximation of differentiable maps on infinite-dimensional manifolds
- PDF PTL-Diffusion: Manifold-Aware Diffusion with Periodic Terminal Laws
- PDF iMaC: Translating Actions into Motion and Contact Images for Embodied World Models
- PDF AHA-WAM:Asynchronous Horizon-Adaptive World-Action Modeling with Observation-Guided Context Routing
- PDF Evaluation Cards: An Interpretive Layer for AI Evaluation Reporting
- PDF Topological Neural Operators
- PDF Echo-Memory: A Controlled Study of Memory in Action World Models
- PDF Bandits for Efficient Experimentation: Adapting to Control Group, Preferences, and Context Drifts
arXiv Quantitative Biology
- PDF Discovering Functionally Selective Brain Regions with a Deep Topographic Multimodal Model
- PDF The Challenge of Cell Segmentation in Spatially Resolved Transcriptomics
- PDF Correlation Is Not Enough: Embedding Human Metadata for Individual Causal Discovery
- PDF Integrating gene regulatory priors into Transformer attention with scTransformer for interpretable scRNA-seq analysis
- PDF Percolation and clustering in ecological communities: A dynamical theory
- PDF Natural Selection in the Wake of Catastrophe
- PDF A systematic investigation of molecular encoding methods for drug property predictions across neural network and Transformer encoder-based model
- PDF A multi-agent system for spine MRI report generation from multi-sequence imaging
- PDF When Three-Dimensional Conformer Ensembles Improve Molecular Property Prediction Beyond Two-Dimensional Fingerprints: A Systematic Study
- PDF Predictable Mean-Field Chaos in Random Recurrent Networks
- PDF This is how the Neocortex Learns
- PDF Protein Dynamics Beyond Structure Prediction
- PDF Querying Counterfactuals on Tissue Graphs with Supervised Disentanglement
- PDF Parameter uncertainty in dynamical models: a practical identifiability index
- PDF Matrix representations and distance metrics for unlabeled ranked phylogenetic networks
arXiv Quantitative Finance
- PDF Weighted universal approximation of differentiable maps on infinite-dimensional manifolds
- PDF Option prices from operational-time reaction-boundary lattices
- PDF Volatility Forecasting and Return Prediction under Market Regimes: Evidence from High-Frequency Chinese Equity Data
- PDF Axiomatic Market Making
- PDF Benchmarking Deep Time Series Models for Equity Portfolios
- PDF Reverse Stress Testing for Multivariate Scenarios: A Conditional Framework for Stressed Time Series
- PDF Addressing Market Regime Changes and Heavy-Tailed Returns in Portfolio Optimization via Bayesian VAR and Elliptical Black-Litterman
- PDF Continuous Cash-Overlay Filters for a Static Growth--Defensive Risk Sleeve: Slow-Tail Compensation, V-Shape Crash Brakes, Walk-Forward Validation, and Max-Cash Combination
- PDF Proof of Stake economy under centralized exchanges--a mean field model
- PDF Evaluating AI Investment Strategies
- PDF Cross-sectional topological anomaly scores and intraday return predictability in the S&P 500: A BallMapper, decoder-conditional VAE, and Function-on-Function regression approach
- PDF Stock Investment: The p-index Approach
- PDF TT-DAC-PS: Twin-Target Deterministic Actor-Critic with Policy Smoothing for Optimal Trade Execution
- PDF Beyond Agent Architecture: Execution Assumptions and Reproducibility in LLM-Based Trading Systems
- PDF Macro Economists in the Machine: A Multi-Agent LLM Framework for Commodity-Related ETF Portfolio Construction