Protein Data Bank
- 3D 10AJ: Crystal Structure of Human WRN helicase with compound 1
- 3D 10AK: Crystal Structure of Human WRN helicase with compound 4
- 3D 10AP: Crystal Structure of Human WRN helicase with compound 26
- 3D 11BC: Human Nap1 in complex with HIV-1 Rev
- 3D 11BD: human nucleosome assembly protein 1 (human Nap1)
- 3D 11BE: HIV-1 Rev Filament
- 3D 11GI: Human Argonaute2 WT - guide(3 prime-amino) RNA in complex with a fully complementary target
- 3D 11GJ: Human Argonaute2 R315V/H316A - guide10U RNA in complex with a complementary target to position 19
- 3D 11GK: Human Argonaute2 R315V/H316A - guide RNA in complex with a fully complementary target (conformation 2)
- 3D 11HK: SARS-CoV-2 spike S2 trimer stabilized in the early fusion intermediate conformation (E-FICs-v3) bound to the VN01H1 Fab (Fab local refinement)
PDB Nitrogen Cycle
- 3D 11KR: FabG1 targeting prion oligomers and fibrils
- 3D 9MLE: Crystal structure of Asp49 Phospholipase A2 isolated from Lachesis muta
- 3D 9S2X: Crystal structure of the human RAGE ectodomain in complex with murine S100A6 mutant Y84C
- 3D 9T46: Crystal structure of the Fab 40G5c in complex with a CD3 epsilon peptide
- 3D 9TNG: Crystal Structure of the third PDZ domain of PSD-95 protein E401R mutant
- 3D 9Y0T: Crystal structure of human MAIT A-F7 TCR-MR1*02-5-OP-RU complex
- 3D 23KA: pre-miR-6074 internal loop in complex with amiloride (Form 2)
- 3D 28OD: Crystal structure of C35 bound to Hem
- 3D 28PN: CryoEM structure of native quinol dependent Nitric Oxide Reductase at pH 8.0 on gold grid.
- 3D 28PP: CryoEM structure of native quinol dependent Nitric Oxide Reductase Arg720Ala variant at pH 6.5 on gold grid.
PDB Photosynthesis
- 3D 29KI: Spinach Ferredoxin I, Reduced, -400 mV
- 3D 9KDT: Cryo-EM structure of 80S ribosome
- 3D 9KDU: Cryo-EM structure of 80S ribosome
- 3D 9KDV: Cryo-EM structure of 80S ribosome
- 3D 9KDW: Cryo-EM structure of 80S ribosome
- 3D 9PIH: E. coli 70S ribosome bound to Doxycycline
- 3D 9PII: E. coli 70S ribosome bound to Sarecycline
- 3D 9PIJ: E. coli 70S ribosome bound to Minocycline
- 3D 9PJ7: C. acnes 70S ribosome bound to Doxycycline
- 3D 9PJ8: C. acnes 70S ribosome bound to Sarecycline
PDB PFAS Degradation
- 3D 9H6S: Structure of the V606M/W622L mutant of myosin UNC-54
- 3D 9QZA: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZR: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZS: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZU: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZV: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZW: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZX: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9QZZ: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
- 3D 9R02: Room temperature fragment screening of soluble epoxide hydrolase by serial crystallography
Project Gutenberg
- The Time Machine EPUB PDF
- Ulysses EPUB PDF
- Thumbelina EPUB PDF
- The Romance of Lust EPUB PDF
- The Odyssey EPUB PDF
- The Masque of the Red Death EPUB PDF
- Pride and Prejudice EPUB PDF
- Adventures of Huckleberry Finn EPUB PDF
- The Adventures of Sherlock Holmes EPUB PDF
- Great Expectations EPUB PDF
- Moby Dick EPUB PDF
- A Modest Proposal EPUB PDF
- The Secret Garden EPUB PDF
- Bleak House EPUB PDF
- The Bible, Douay-Rheims Version EPUB PDF
GitHub bioRxiv
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DeepYoke/ToxiMol
8
Python
📄 Preliminary version of ToxiMol-benchmark [arXiv:2506.10912](https://arxiv.o...
-
brain-score/vision
185
Python
A framework for evaluating models on their alignment to brain and behavioral mea...
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lyndonkl/claude
98
Unknown
Agents, skills and anything else to use with claude
-
nathanieljevans/GSNN
8
Python
Graph Structured Neural Networks
-
IndexThePlanet/Logan
189
Unknown
Logan Unitigs and Contigs
-
InternScience/MolClaw
13
Python
MolClaw: An Autonomous Agent with Hierarchical Skills for Drug Molecule Evaluati...
-
sagar87/spatialproteomics
43
Python
Spatialproteomics is a light weight wrapper around xarray with the intention to ...
-
natverse/fafbseg
11
R
Support functions for analysis of Drosophila connectomes especially the FAFB-Fly...
-
anthropics/knowledge-work-plugins
12231
Python
Open source repository of plugins primarily intended for knowledge workers to us...
-
dna-seq/just-dna-lite
5
Python
lite and fast version of just-dna-seq personalized genomic platform
Synthetic Biology
- Abiotic Stress Sensing in Plants: Biochemical and Biophysical Basis.
- Neighborhood deadwood and yard rewilding modulate commensal microbiomes and inflammatory signals among urbanites.
- Integrated transcriptomic and metabolomic analysis reveals the salt tolerance mechanisms in Lagerstroemia indica.
- TgZFP9-TgSBP3 and TgDOF5.4-TgPDH Regulatory Networks Drive Photosynthate Allocation to Oil in Torreya grandis Kernels.
- Integrative metabolomic and transcriptomic analyses reveal coordinated variation in phenolic acid metabolism and redox-related traits in Ocimum basilicum accessions.
- A synthetic cell microreactor with two types of interacting dynamic DNA-based pores.
- PromoterAtlas: decoding regulatory sequences across Gammaproteobacteria using a transformer model.
- Changes in vitamin C, vitamin E, and carotenoid metabolism during early kernel development in maize.
- Metabolic engineering of Saccharomyces cerevisiae to enhance resistance toward microbial toxicity in agave extracts.
- Compartmentalized metabolic engineering in eukaryotic microbial cell factories: strategies and applications.
- Lycium barbarum glycopeptide alleviates diabetic retinopathy and hepatic lipid disorder via modulation of the LXR-α/ABC transporter axis.
- Toward predictable and programmable genetic circuits in plants.
- Micropeptides in Cancer and Immunity: Diagnostic, Therapeutic, and Synthetic Biology Frontiers.
- Overexpression of Hiilp2 enhances the biosynthesis of unsaturated fatty acid in Hermetia illucens.
- Ionomic, metabolomic, and enzymatic responses of the sea cucumber Apostichopus japonicus to single and combined salinity and metal stress.
Biotechnology
- Emerging Proteomic Approaches in Sperm Sorting: Shaping the Future of Reproductive Biotechnology.
- CRISPR-Mediated Intronic Knockin of Pre-amiRNA Enables Targeted Gene Silencing.
- Reinterpreting diffusive constraints: Concentration cloaking via homogenization and pseudoconformal mapping.
- Toxic and useful: harnessing yeast killer toxins for product recovery.
- Integrated transcriptomic and metabolomic analysis reveals the salt tolerance mechanisms in Lagerstroemia indica.
- Molecular biology of Pleurotus mushrooms: genomic resources, genetic manipulation, and regulation mechanisms.
- Mouse eyes photosynthesize after plant-to-animal transplant.
- rAAV8 encapsidated HMR-001/z enables high efficiency hepatic transduction and restores hemostasis in hemophilic mice.
- DNA-guided CRISPR-Cas12 for cellular RNA targeting.
- Guide DNA - not RNA - expands the CRISPR toolkit.
- CCR7 orchestrates the malignant progression of memory B cells in MYC-overexpressing lymphoma.
- CRISPR-based environmental detection of Burkholderia pseudomallei identifies sanitation gaps and melioidosis risk in northeast Thailand.
- Arid3b suppresses CD8 + T cell infiltration and function in microsatellite-stable colorectal cancer via Runx3.
- CRISPR screening identifies TRIM27 as a destabilizer of the Smith-Magenis syndrome protein RAI1.
- Micropeptides in Cancer and Immunity: Diagnostic, Therapeutic, and Synthetic Biology Frontiers.
AI & Machine Learning
- Emerging trends in artificial intelligence research in lymphedema: An evaluation in light of bibliometric and altmetric data.
- Quantification of 14 Major and Minor Cannabinoids with Absorbance-Transmittance Excitation-Emission Matrix Spectroscopy and Machine Learning.
- Conscious Tactile Perception Depends on Early Processing in Primary Somatosensory Cortex.
- Double descent: When do neural quantum states generalize?
- Interpretable liquid crystal phase classification via two-by-two ordinal patterns.
- Universal spin models are universal approximators in machine learning.
- Building causation links in stochastic nonlinear systems from data.
- Deep learning for assay nuisance compound detection using a gated co-attention graph embedding model (CAGE-Fusion).
- Coxmos: interpretable survival models for high-dimensional and multi-omic data.
- Integrative bioinformatics and machine learning reveal an association of LTF and MMP8 with systemic inflammation and lung injury.
- Construction of a predictive model for the risk of non-alcoholic fatty liver disease in patients with sleep apnea syndrome based on multiple machine learning algorithms: a multicenter study.
- Hope and fear in AI-based language teaching: opportunities, challenges, and emotions.
- Operational mechanisms and application advances in artificial olfactory systems.
- Interpretable machine learning methods based on oscillometry and electric modeling for the diagnostic of respiratory dysfunction in silicosis.
- Noninvasive early detection and grading of pneumoconiosis via plasma proteomics and machine learning: PRSS3 as a potential biomarker.
Neuroscience
- Discovery of Kv3.1 channel inhibitors reveals VU0521426 as a state‑dependent inactivator preferentially active against pathogenic gain‑of‑function mutants.
- Dynamical diversity in conductance-based neuron response to kilohertz electrical stimulation.
- Multilators on a 3-Torus: A framework for high-dimensional coupled oscillators.
- Ginsenosides in the management of depression: a comprehensive pharmacological review.
- Technical evolution and short-term outcomes of minimally invasive versus conventional open anterior cervical discectomy and fusion: a systematic review and meta-analysis.
- ABCA1-mediated lipid efflux restrains oxidative stress and neuroinflammation after spinal cord injury.
- Efficacy of transcranial direct current stimulation on motor and cognitive functions in patients with multiple sclerosis: a systematic review and meta-analysis.
- Importance of the inflammasome in gut-brain axis: from pathological driver to therapeutic target.
- Associations of cognitive and behavioural impairment in ALS with brain pathology: pTDP-43 versus microglial activation.
- Decoding collaboration obstacles: a survey on reporting preferences between neuroradiologists and clinical specialists.
- Unveiling the Clinical Impact of Lower Limb Robotic Devices in Neurorehabilitation: An Umbrella Review.
- Disparities in stereotactic radiosurgery receipt in patients with brain metastases from non-small cell lung cancer.
- Inter-brain processes during Live and Represented social moments are inter-related and shaped by behavioral synchrony.
- Canonical coherence for the estimation of within- and cross-frequency cortico-kinematic interactions.
- Ventilator-associated Brain Injury (VABI): Current Understanding.
Climate Science
- The burden of premature births attributed to heat across 13 countries.
- Species-specific responses in forage production and quality to reduced precipitation amount and frequency: Implications for alpine grasslands management.
- Biodegradable facilitation mimics extend the window of opportunity for salt marsh establishment.
- Entropic-dielectric interplay governs ion adsorption in inner electric double layers.
- An integrated microbiological analysis of the soil and rhizosphere of Agave spp. under minimum technological input farming systems.
- Adaptive strategies in young Inga vera subsp. affinis plants under flooding.
- Photocatalytic Synthesis of Pentafluorosulfanyl Ketones, Acetals, and BCP Motifs Utilizing SF(6).
- Wildfire-Altered Soil Water-Extractable Organic Matter Drives Divergent Greenhouse Gas Emissions in Anaerobic Subsurface Soils.
- Continental-Scale Evidence of Farm Management Impacts on Soil Carbon.
- Enhanced Root Exudation as an Adaptation Mechanism to Facilitate Phosphorus Mobilization in a Primary Tropical Forest Under Chronic Nitrogen Deposition.
- Underestimation of Future Agricultural Soil N(2)O Emissions and Abatement Needs.
- Incorporating Thermal Adaptation and Acclimation Improves Light-Use Efficiency Modeling for Estimating Gross Primary Production in Tibetan Plateau Grasslands.
- Youth Perspectives on the Climate Crisis: Motivation and Action Pathways.
- Macronutrient and micronutrient profiles of meat types: insights into human health and diet.
- 2D to 3D: Exploring Variation of Niche Dimensionality Across Consumers in a Coastal Arctic Ecosystem and Implications on Interpretation.
Medicine
- Transanal irrigation for low anterior resection syndrome treatment: international multicentre randomized clinical trial.
- Risk of type 2 inflammation-related diseases during Interleukin-17-inhibitors treatment for psoriasis patients-A retrospective cohort study.
- Single-Cell transcriptomics unveils metabolic and cellular dysregulation in striae gravidarum.
- CD4+ T cells promote fibrosis during metabolic dysfunction-associated steatohepatitis.
- Dose Reduction of Preoperative Radiotherapy in Myxoid Liposarcoma: The Phase 2 DOREMY Nonrandomized Clinical Trial.
- First Report of National Consensus Guidelines for the Diagnosis and Treatment of Helicobacter pylori Infection in Iran.
- Management and predictors of ICU admission in DRESS: A multicentre retrospective cohort study.
- Elucidating the Pathogenic Role of Helicobacter pylori Infection in Hematologic Disorders: Mechanistic Insights and Future Perspectives.
- High-Dose Dual Therapy Versus Bismuth-Containing Quadruple Therapy as Rescue Treatment for Helicobacter pylori Infection: Systematic Review and Meta-Analysis.
- A Bidirectional Association Between Helicobacter pylori Infection and Hyperlipidemia: Clinical Evidence and Mechanistic Insights.
- Correction to "Tegoprazan-Based Triple Therapy for Helicobacter pylori Eradication: A Phase III Multicenter Randomized Clinical Trial".
- An orthotopic organoid-based model to study early CD8⁺ T cell dysfunction and immunotherapy response in colorectal cancer.
- A High-Throughput Assay for Monitoring and Quantifying Amyloid-β Accumulation and Clearance in Alzheimer's Disease Cell Models.
- Biodiesel Production From Waste Cooking Oil: A Study Towards Zero-Discharge Strategy via Pilot-Scale Packed Adsorption Column for Wash Water Treatment and Reuse.
- Asbestos Exposure Induces Malignant - Like Phenotypes via Minority MOMP and Displays Characteristics of Drug-Tolerant Persister Cells.
Genomics
- Single-Cell transcriptomics unveils metabolic and cellular dysregulation in striae gravidarum.
- Imported case of avian influenza A(H9N2) virus infection in a patient with miliary tuberculosis, Italy, March 2026.
- Hungary as a source of West Nile virus diversity and spread in Europe: insights from the 2024 transmission season.
- Interim 2025/26 LP.8.1 vaccine effectiveness estimates against COVID-19 from the Canadian Sentinel Practitioner Surveillance Network (SPSN): insights into possible impact of influenza and other respiratory virus co-circulation.
- Genomic landscape of Candidozyma auris in Italy, 2019 to 2025: emerging diversity of clade I sub-lineages associated with inter-facility transmission and cross-border transfers.
- CRISPR-Mediated Intronic Knockin of Pre-amiRNA Enables Targeted Gene Silencing.
- Super-resolution multimodal spatial transcriptomics reveals an ovoid stem-cell niche structuring de novo shoot regeneration.
- Serotypic and Genomic Diversity of Vibrio anguillarum in Rainbow Trout Farms in Turkey: Implications for Vibriosis Control and Vaccine Candidate Selection.
- Transcriptomic profiling across stages of non-muscle-invasive bladder cancer identifies fibroblast activation protein-alpha as a stromal biomarker associated with progression.
- Genome-wide characterization of LPMOs and CAZymes in camel rumen-derived Paenibacillus barengoltzii highlights strong lignocellulolytic potential.
- HESpotEx: a dual-stream deep learning framework for spot-level gene expression prediction from histological images.
- Molecular biology of Pleurotus mushrooms: genomic resources, genetic manipulation, and regulation mechanisms.
- Characterization of novel lncRNA adrenal expression profiles in response to heat stress in rats.
- Head and neck squamous cell carcinoma: current and emerging therapeutic strategies.
- Population-scale genomic medicine with the Hong Kong Genome Project.
Immunology
- Participation of Civil Society Organisations and Academia in COVID-19 Governance: Insights from a Six Country Study.
- Surveillance and vaccine effectiveness of pertussis, the Netherlands, 2012 to 2024, with an unprecedented surge in 2023 and 2024.
- Large outbreak of group B invasive meningococcal disease in young adults in South East England, March 2026.
- Anticipating impact of implementing PCV20 or PCV21 vaccines for older adults in the immunisation programme for invasive pneumococcal disease, using nationwide surveillance data, Israel, 2009 to 2024.
- Waning humoral immunity following monkeypox virus infection and vaccination, Canada, 2020 to 2023.
- Interim 2025/26 LP.8.1 vaccine effectiveness estimates against COVID-19 from the Canadian Sentinel Practitioner Surveillance Network (SPSN): insights into possible impact of influenza and other respiratory virus co-circulation.
- Product- and schedule-specific vaccine effectiveness against invasive Haemophilus influenzae serotype b (Hib) disease, The Netherlands, 2005 to 2023.
- Molecular genetic characterisation of norovirus GII.17 strains circulating in South Korea in 2024.
- Inequalities in adolescent HPV, Td/IPV and MenACWY vaccination coverage by socio-economic status: an ecological study, England, 2017 to 2024.
- Social Inequality in the Uptake of Varicella Vaccination: A Danish Nationwide Observational Study.
- Avian Malaria Infections Are Not Associated With Host Genetic Diversity: A Meta-Analysis.
- Elevated Subfraction 5 of Low-Density Lipoprotein Cholesterol in Patients With Antiphospholipid Antibody Syndrome.
- A rare Gerbich-negative (Ge:-2,-3,4) phenotype in a Peruvian patient.
- A rapid phage-free platform for antigen-specific VNAR screening with BATCH system.
- Serotypic and Genomic Diversity of Vibrio anguillarum in Rainbow Trout Farms in Turkey: Implications for Vibriosis Control and Vaccine Candidate Selection.
Microbiology
- Microbiology of dental decay and periodontal disease: A review.
- Clinical, endoscopic, morphological and microbiological characteristics of diverticular disease in patients with metabolic disorders.
- Mycetoma.
- Premature transcription termination modulates stochastic gene expression in bacteria.
- Bacterial Extracellular Vesicles: New Hype or Hope to Explain Reproductive Host-Microbiota Interactions.
- The library of isolated bacteria from gut microbiota in classical fish models: Zebrafish (Danio rerio), marine (Oryzias melastigma) and freshwater (Oryzias latipes) medaka.
- Converting One In Vitro Selected DNA Molecule Into Two Bacteria-Responsive DNAzymes by Regulation of Reaction Conditions.
- Metagenomic Next-generation Sequencing in Central Nervous System Infections: Clinical Strategies, Evidence, and Best Practices.
- The Association Between Self-Reported Nicotine Vaping and the Human Oral Microbiome: A Systematic Review.
- Dietary Niches Drive Microbial Community Assembly, Network Reorganization, and Symbiont Evolution in Freshwater Fish Gut Microbiomes.
- ISG15 negatively regulates RIPK3-mediated cell death and viral pathogenesis.
- An integrated microbiological analysis of the soil and rhizosphere of Agave spp. under minimum technological input farming systems.
- Sulfated Cyclocarya Paliurus Polysaccharide Sorchestrates the Gut Microbiome to Mobilize a Host-Derived 12-HEPE Against Ulcerative Colitis.
- Early supplemental feeding improves post-weaning growth restriction in lambs via the gastrointestinal-metabolic axis.
- Evaluation of a chromogenic medium, CHROMagar StrepA, for the detection of Streptococcus pyogenes in throat swab samples.
Evolutionary Biology
- Fitness inference tested by in silico population genetics.
- Sequence and structural alignments reveal insights into ANKLE2 evolution and function.
- Signature of resistance gene evolution and pyrethroid resistance escalation in the major malaria vector Anopheles funestus across Kenyan malaria-endemic regions separated by the Rift Valley.
- Technical evolution and short-term outcomes of minimally invasive versus conventional open anterior cervical discectomy and fusion: a systematic review and meta-analysis.
- Host-driven adaptive radiation and host usage in sponge-associated barnacles.
- Prenatal Diagnosis of Conotruncal Anomalies Before 16 Weeks: Longitudinal Evolution, Genetic Findings and Early Prognostic Markers.
- Hyperspectral Vertical Remote Sensing Bridges the Satellite-to-Surface Gap: Unraveling Height-Resolved Evolution Mechanisms of Atmospheric Formaldehyde in China.
- Modelling the structural evolution, electronic structures and optical properties of Sc(6)Se(n)(0/-) (n = 1-12) clusters.
- Evolution of surgical strategy for superior kyphosis restoration in patients with Lenke 1 & 2 adolescent idiopathic scoliosis.
- Evolution of molecular and cellular bases of self-sacrificing gall repair in social aphids.
- Genetic evolution and epidemiological dynamics of porcine epidemic diarrhea virus in Guangxi, China, from 2020 to 2023.
- Engineering Interfacial Hydrogen-Bond Networks to Accelerate Lattice Oxygen Regeneration for Stable Oxygen Evolution Catalysis.
- Non-random mutations and directed evolution.
- Radiotherapy in Primary Central Nervous System Lymphoma: Evolution of its role and current position in combined treatment strategies.
- Dynamic structural evolution of carbon catalysts during persulfate activation rewires nonradical pathways for water decontamination.
Molecular Ecology
- A new approach to quantify isotopic (co)variation across levels of biological organization using double-hierarchical generalized linear models.
- Fitness inference tested by in silico population genetics.
- Neighborhood deadwood and yard rewilding modulate commensal microbiomes and inflammatory signals among urbanites.
- Mayflies (Insecta, Ephemeroptera) as indicators of diffuse agricultural pollution.
- Horizon scanning for European wild pollinators identifies world-leading legislation as a key opportunity for pollinators.
- Identifying marine climate refugia to advance climate-smart conservation.
- Clonality, management, and geography shape genetic structure in a perennial species with restricted distribution.
- Exploring nocturnal soundscapes in an Australian open forest system using acoustic indices.
- Biodiversity and conservation challenges in mangrove ecosystems: a comparative study of faunal assemblages and community perceptions in Aceh, Indonesia.
- Enhancing Role of Nitrogen Fixation in Biogeochemical Cycles of the Pacific Arctic.
- Evolving bioinformatics services - the journey of KPI metrics with Scorpion.
- Phylogenetic and Population Genetic Analyses Reveal Patterns of Divergence Among Isolates of Ceratocystis manginecans.
- Ancestry-informative markers and variants of uncertain significance on hereditary cancer panels.
- Acanthopsaron Fricke, 2024 is a junior synonym of Parapercis Bleeker, 1863, and A. striatum Fricke, 2024 is a junior synonym of P. fuscolineata Fourmanoir, 1985 (family Pinguipedidae).
- Four new species of the whalefish genus Gyrinomimus Parr, 1934, with the establishment of three new species groups (Beryciformes, Cetomimidae).
arXiv Physics
- PDF Eradicating Negative Transfer in Multi-Physics Foundation Models via Sparse Mixture-of-Experts Routing
- PDF Axion magnetohydrodynamics and reconnection-driven axion bursts
- PDF Multiscale order, flocking and phenotypic hysteresis in the cellular Potts model of epithelia
- PDF Single-Device VOC Fingerprinting via Polarization-Selective Anisotropic BeS-Clad Silicon Microring Resonator
- PDF Mid-infrared Assisted THz Phonon Amplification in a 2D Semiconductor for Room Temperature Detection
- PDF Rovibrational structure and electric dipole moments of the AcOCH$_3$+ ion
- PDF Two Protons, Two Positrons, and Four Electrons: Covalent Bond with van der Waals Characteristics
- PDF Adaptive homotopy continuation for robust dispersion curve computation in viscoelastic waveguides: guaranteed branch identity continuity
- PDF Transient dynamics of parametric driving for single-electron image current detection in a Paul trap
- PDF Fast contracted Clebsch--Gordan tensor products for equivariant graph neural networks
- PDF The Role of Magnetic Reconnection in Energizing Protons and Heavier Ions at the Heliospheric Current Sheet
- PDF Multifunctional Barophotonic Control of Resonators and Metasurfaces
- PDF Numerical simulations of waves and turbulence in coronal loops: observables and spectra
- PDF Accurate Modeling of Rydberg Atoms and Their Interactions: Theory and Implementation in PairInteraction
- PDF Hybrid Nanophotonic Scintillators for Enhanced X-ray Absorption, Emission, and Time Resolution
arXiv Mathematics
- PDF Translation symmetry-enforced long-range entanglement in mixed states
- PDF Non-Invertible Symmetries on Tensor-Product Hilbert Spaces and Quantum Cellular Automata
- PDF Universal quantum resource distillation via composite generalised quantum Stein's lemma
- PDF Modal group theory: homomorphisms
- PDF On the Nonexistence of Continuous Immersions for Discrete-time Systems
- PDF Avoiding logical strength in real analysis
- PDF Asymptotically Self-Similar Blowup for 3D Incompressible Euler with $C^{1, 1/3-}$ Velocity I: $C^{\infty}$ 1D Limiting Profiles
- PDF Noether symmetries and conservation laws of a class of time-dependent multidimensional nonlinear wave equations
- PDF Improved Ramsey bounds for generalized Schur equations
- PDF Guises and Perspectives: An Intentional and Hyperintensional Sketch
- PDF New Bounds for Integer Flows and Verma Modules, via Denormalized Lorentzian Laurent Series
- PDF Asymptotically Self-Similar Blowup for 3D Incompressible Euler with $C^{1, 1/3-}$ Velocity II: 3D Profiles, Blowup, and Limiting behavior
- PDF Constructive higher sheaf models with applications to synthetic mathematics
- PDF An excluded minor theorem for the 6-wheel
- PDF Real geometric transcendence for the Gamma function
arXiv Computer Science
- PDF EntityBench: Towards Entity-Consistent Long-Range Multi-Shot Video Generation
- PDF ATLAS: Agentic or Latent Visual Reasoning? One Word is Enough for Both
- PDF RefDecoder: Enhancing Visual Generation with Conditional Video Decoding
- PDF VGGT-$Ω$
- PDF Aligning Latent Geometry for Spherical Flow Matching in Image Generation
- PDF RAVEN: Real-time Autoregressive Video Extrapolation with Consistency-model GRPO
- PDF FutureSim: Replaying World Events to Evaluate Adaptive Agents
- PDF Articraft: An Agentic System for Scalable Articulated 3D Asset Generation
- PDF VGGT-Edit: Feed-forward Native 3D Scene Editing with Residual Field Prediction
- PDF Quantitative Video World Model Evaluation for Geometric-Consistency
- PDF Is Grep All You Need? How Agent Harnesses Reshape Agentic Search
- PDF When Are Two Networks the Same? Tensor Similarity for Mechanistic Interpretability
- PDF Warp-as-History: Generalizable Camera-Controlled Video Generation from One Training Video
- PDF From Plans to Pixels: Learning to Plan and Orchestrate for Open-Ended Image Editing
- PDF Eradicating Negative Transfer in Multi-Physics Foundation Models via Sparse Mixture-of-Experts Routing
arXiv Quantitative Biology
- PDF Learning Developmental Scaffoldings to Guide Self-Organisation
- PDF REALM: Retrospective Encoder Alignment for LFP Modeling
- PDF MetaGEM: Bottom-Up Reconstruction of Genome-Scale Metabolic Networks via Deep Enzyme-Metabolite Anchoring
- PDF Are cortical microcircuits optimized for information flux? -- A simulation-based reverse engineering study
- PDF Autonomous Reshaping of Expression Landscapes by DNA Methylation
- PDF Detection of residual native state entropy changes upon mutation in Fyn SH3
- PDF Multiple mechanisms of rhythm switching in recurrent neural networks with adaptive time constants
- PDF Approximate Macroscopic Dynamics of Spiking Neural Networks Based on Solutions to the Transport Equation
- PDF GenCircuit-RL: Reinforcement Learning from Hierarchical Verification for Genetic Circuit Design
- PDF Do Language Models Align with Brains? Prediction Scores Are Not Enough
- PDF ENSEMBITS: an alphabet of protein conformational ensembles
- PDF The Co-evolution of Costly Signaling and Cooperation in Social Dilemmas
- PDF Kin-ematic Exclusion in Active Matter: Modelling Mutual Inhibition in \textit{Pseudomonas aeruginosa} Sibling Colonies
- PDF Characterizing Universal Object Representations Across Vision Models
- PDF Shared quasispecies architecture in experimental and natural RNA virus populations
arXiv Quantitative Finance
- PDF Multi-regime Markov-switching models with time-varying transition probabilities: An application to U.S. Treasury yields
- PDF Synthetic American Option Pricing via Jump-HMM-Driven Heston Implied Volatility
- PDF Vector-Quantized Discrete Latent Factors Meet Financial Priors: Dynamic Cross-Sectional Stock Ranking Prediction for Portfolio Construction
- PDF The fine structure of electricity price volatility
- PDF Enhancing a Risk Model by Adding Transient Statistical Factors
- PDF Yield Curves Dynamics Using Variational Autoencoders Under No-arbitrage
- PDF Optimal investment and Pension policy in Pay-As-You-Go systems under forward utility and ageing population
- PDF The P behind Q: Empirical Evidence from Physical Drift in Put-Call Parity
- PDF A deep learning approach for pricing convertible bonds with path-dependent reset and call provisions
- PDF RED-2400: A Public Benchmark of Algorithmically-Rejected Trading Events with Outcome Labels
- PDF Nonlinear filtering with stochastic discontinuities
- PDF Bayesian Dynamic Modeling of Realized Volatility in Financial Asset Price Forecasting
- PDF On convergence of the Mayer problems arising in the theory of financial markets with transaction cost
- PDF GeomHerd: A Forward-looking Herding Quantification via Ricci Flow Geometry on Agent Interactive Simulations
- PDF Fill-Side Non-Retail Trading on Polymarket: An Empirical Study of Behavioral Tiers and Microstructure Signatures Under Quote-Attribution Constraints