Protein Data Bank
- 3D 10MA: Closed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a closed active site (closed TL, SI3 and RH-FL)
- 3D 10MB: Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10MC: Open2 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10MD: Open3 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10RX: SthK closed state at low temperature, cAMP-bound in DOPC nanodiscs
- 3D 10VB: Crystal structure of GeoCas9 HNH domain bound to S78A mutant anti-CRISPR AcrIIC1
- 3D 10VC: Crystal structure of GeoCas9 HNH domain bound to anti-CRISPR AcrIIC1
- 3D 11AD: Structural basis for high-affinity inhibitor binding to lipid kinases PIP4K2A and PIP4K2B
- 3D 11FC: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo CTGAACTT
- 3D 11GX: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo CGCAACTT
PDB Nitrogen Cycle
- 3D 11KB: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo AACTGTTG
- 3D 11LB: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo GCAACTGG
- 3D 21JV: Alcohol Oxidase Mod2p from Ogataea methanolica
- 3D 9QSL: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z4666192264
- 3D 9SW2: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate a (composite structure)
- 3D 9SW3: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
- 3D 9SW4: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate a (composite structure)
- 3D 9SW5: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate b (composite structure)
- 3D 9SW6: Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
- 3D 9ULX: crystal structure of apo AbGHMP
PDB Photosynthesis
- 3D 21JV: Alcohol Oxidase Mod2p from Ogataea methanolica
- 3D 9QSL: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z4666192264
- 3D 9QWT: Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
- 3D 9SW2: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate a (composite structure)
- 3D 9SW3: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
- 3D 9SW4: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate a (composite structure)
- 3D 9SW5: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate b (composite structure)
- 3D 9SW6: Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
- 3D 9UM2: Pterocarpan Reductase GuPTR1 from Glycyrrhiza uralensis
- 3D 9RDD: Nicotinic Acid N-glucoside Reductase NaGR (A622) in complex with NADP+ and Nicotinic Acid N-glucoside
PDB PFAS Degradation
- 3D 9PPU: Beta-sandwich forming metallopeptide
- 3D 9QYO: Structural characterization of a mannose-binding site in human RNase2
- 3D 9R6D: Structural characterization of a trehalose-binding site in human RNase2
- 3D 9R6E: Structural characterization of a N-Acetyl-D-glucosamine-binding site in human RNase2
- 3D 9RAN: Structural characterization of a galactose-binding site in human RNase2
- 3D 9UIU: Crystal structure of alpha-parvin CH1 dimer
- 3D 9ULJ: Phenylquinoline derivatives as soluble epoxide hydrolase inhibitor
- 3D 9QR7: Structural characterization of a N-acetylmuramic acid-binding site in human RNase2
- 3D 9UBE: Metallo-Beta-Lactamase VIM-2 in Complex with MBL/SBL Inhibitor FB1-9
- 3D 9UE4: Serine Beta-Lactamase OXA-48 in Complex with MBL/SBL Inhibitor FB3-2
Project Gutenberg
- Mansfield Park EPUB PDF
- The Fall of the House of Usher EPUB PDF
- Flatland EPUB PDF
- The Secret Garden EPUB PDF
- A Christmas Carol EPUB PDF
- A Princess of Mars EPUB PDF
- A Study in Scarlet EPUB PDF
- Notes from the Underground EPUB PDF
- Bleak House EPUB PDF
- The Time Machine EPUB PDF
- The Jungle Book EPUB PDF
- The Picture of Dorian Gray EPUB PDF
- Hamlet EPUB PDF
- The Turn of the Screw EPUB PDF
- The Adventures of Tom Sawyer EPUB PDF
GitHub bioRxiv
-
aswarren/pangenome_graphs
10
Python
Constructing pan genome graphs from "protein family" assignments
-
epiblastai/homeobox
5
Python
The multimodal biomedical data atlas builder
-
drpedapati/sciclaw
64
Go
Paired-scientist AI assistant for reproducible research — lightweight Go runtime...
-
nwamsley1/Pioneer.jl
21
Julia
CLI toolkit for fast analysis of DIA proteomics experiments and in silico librar...
-
lgatto/MSnbase
137
R
Base Classes and Functions for Mass Spectrometry and Proteomics
-
kbaseincubator/BERIL-research-observatory
13
Jupyter Notebook
BERIL Research Observatory - Exploring microbial ecology with the KBase Data Lak...
-
snap-stanford/Biomni
3042
Python
Biomni: a general-purpose biomedical AI agent
-
skalalab/flim_playground
15
Python
Full Docs @ https://skalalab.github.io/flim_playground_doc/
-
bioFAM/mofaflex
38
Python
factor models for omics data
-
cafferychen777/mLLMCelltype
640
Python
Cell type annotation for single-cell RNA-seq using multi-LLM consensus
Synthetic Biology
- Exogenous GABA enhances phenolics and maintains antioxidant capacity of blueberries by modulating the GABA shunt.
- Correction for Walls et al., The radical SAM enzyme EpeE exhibits distinct site reactivity during the biosynthesis of the RiPP natural product epipeptide.
- Encapsulation in a Bacterial Microcompartment Shell Improves Thermal Stability of a Glycolytic Enzyme.
- Metabolic engineering of Escherichia coli for the biosynthesis of nylon 6 and nylon 6,6 monomers.
- Membrane Composition Influences Expression Yield of Plant Cytochrome P450s in E. coli Lysate-Based Cell-Free Systems.
- N- Carbamoylglutamate enhances bull spermatogenesis via Paraprevotella-Mediated vitamin B6 biosynthesis in rumen microbiota.
- Temporal Metabolomics Profiling Reveals Liver Metabolic Control in Single and Repeated Exhaustive Exercise in Murine Models.
- Recent advances in exploring the composition and evolution of the prokaryotic selenoproteome.
- Enzymatic Redox Gating Directs Oxidative Divergence in Acyclic Peroxides Biosynthesis.
- PrfH accelerates repair of colicin E3 - damaged translating ribosomes by RtcB2.
- Synthesis and Biological Evaluation of a New Dihydroceramide Desaturase Inhibitor for the Treatment of MASLD.
- Depth Stratification Shapes Viral Diversity, Interactions, and Metabolic Potential in a Deep Freshwater Lake.
- Engineering a self-organized enzyme cascade for enhanced cell-free biosynthesis of 3-hydroxypropionic acid.
- Dataset of the changes in sugarbeet taproot cell wall composition, firmness, and cell wall-related gene expression as a function of postharvest storage time and temperature.
- Low amylose content in rice lowac2 mutant is caused by a new allele of C(2)H(2) zinc-finger protein that regulates pre-mRNA splicing of Wx(b).
Biotechnology
- Encapsulation in a Bacterial Microcompartment Shell Improves Thermal Stability of a Glycolytic Enzyme.
- Genome editing generates high oleic soybean and eliminates beany flavors.
- Human embryo editing: Ten years of breakthroughs and challenges.
- A systematic analysis of the inherent dose uncertainty in autologous CAR T-cell products.
- Principles and practices for successful gene therapy innovative contracting: insights from a multistakeholder convening.
- First brassinosteroid-based dwarf mutant discovered and characterized in grapevine.
- Nuclear export as a therapeutic vulnerability in ZFTA-RELA ependymoma.
- A Modified Cas9 Scaffold Allows Extension of the Virus-Induced Gene Editing Technology to the Large Potyvirus Genus.
- A Modular and Programmable Cas13d Platform for RNA Single Nucleotide Variant Detection.
- A comprehensive review of regulatory mechanisms of novel enterotoxin genes in Staphylococcus aureus from meat sources.
- EnAcrPred: A robust ensemble machine learning framework for identifying anti-CRISPR proteins.
- AlphaFold3-guided tracrRNA redesign yields small monomeric Cas12f RNPs.
- DUSP11 is an RNA triphosphatase that limits PspCas13b activity by destabilizing gRNA abundance in mammalian cells.
- A kinetic approach for mapping seed regions of CRISPR ribonucleoprotein and improving specificity.
- A universal and orthogonal safety valve for CRISPR/Cas12a without chemical modification or external stimulation.
AI & Machine Learning
- TWT: Textual white-box transformer for natural language understanding.
- Finite/fixed-time synchronization of complex-valued switched coupled neural networks via unified control strategy.
- An integrated microneedle device for skin interstitial fluid multiplexed detection and deep learning-based analysis of acute myocardial infarction biomarkers.
- Accurate identification of goat milk on small-scale geographical origin: A nuclear magnetic resonance spectrometry and machine learning study.
- Joint use of ground-penetrating radar and hydraulic-partitioning tracer tomography to improve characterization and long-term prediction of DNAPL source zones in multi-facies aquifers.
- Cheminformatics analysis, machine learning-based QSAR model building and virtual screening: identification of dual ROCK1 and TGFBR1 inhibitors for the treatment of cancer metastasis.
- A Proposed Participatory Framework for Explainable AI in mHealth: Mixed Methods Study Integrating User and Stakeholder Requirements.
- Cultural Relevance and Acceptability of Cognitive Behavioral Therapy Techniques Adapted by AI or a Human Psychologist: Experimental Study.
- What FDA Clearance Does, and Does Not, Mean for Artificial Intelligence.
- AI in Clinical Decision Support Systems: Promising Applications and Strategies for Managing Data Challenges.
- Physician Perspectives on ChatGPT-4o as a Patient Resource for Abdominal Cancer Surgeries: Cross-Sectional Survey.
- Investigating the Implementation and Impact of AI-Assisted Fall Prevention in Hospitals: Protocol for a Multicenter, Multimethod Observational Study in Sweden (SAFE).
- Artificial Intelligence (AI) Impact on Dental Education and Curriculum: A Systematic Review Following PRISMA Guidelines.
- Integrating Machine Learning Interatomic Potentials with MMPBSA for Accurate Protein-Ligand Binding Free Energy Calculations.
- Methods for estimating the burden of acute tropical infectious diseases: A scoping review.
Neuroscience
- TREM1 inhibition via LP17 alleviates secondary spinal cord injury by activating AMPKα-PINK1-parkin-dependent microglial mitophagy.
- Unraveling the link between brain injury and enhanced artistic skills.
- Differential awakening of the sciatic nerve: illustrative case.
- Spinal epidermoid cyst: illustrative case.
- Tenecteplase 4.5 to 24 h after non-LVO stroke with potentially salvageable brain tissue improved functional outcomes at 90 d.
- Brain Structural Covariance Networks in Long-Term First-Person Shooter and Multiplayer Online Battle Arena Players: Cross-Sectional Study.
- Evaluating the Efficacy of Marma Therapy for Pain in Lumbar Disc Herniation With Radiculopathy: Protocol for a Randomized Controlled Trial.
- Typical and Atypical Frequency-Based Subtypes of EEG Reactivity in Hospitalized Patients and Association With Comorbidities and Outcomes.
- Extracorporeal versus conventional cardiopulmonary resuscitation for out-of-hospital cardiac arrests.
- Ginkgo biloba as a Promising Candidate for Traumatic Brain Injury: Insights From Preclinical and Clinical Studies.
- Engineering High-fidelity Preclinical Mouse Model for Brain Metastasis using Interlock Pulsatile Injection Technique and Microsurgical Vascular Repair.
- An anatomical and connectivity atlas of the tree shrew brain to bridge rodent and primate neuroanatomy.
- Combined Weighted Feature Correlation Approach for Enhanced EEG-Based Emotion Recognition Across Diverse Datasets.
- How Statistical Methods, Hemispheric Data and Masking Approaches Shape Probabilistic Sweet Spots in Deep Brain Stimulation.
- Optimal definition of early neurological deterioration in thrombolysis-treated acute ischemic stroke: ENCHANTED study.
Climate Science
- Farmers And Ranchers: The Stress And Anxiety Fueled By Climate Change, And Interventions That Could Help.
- Empowering South Los Angeles Tenants To Advance Climate Policies That Protect Their Rights.
- Creating Climate Change Action Within Communities.
- Assessing The Implementation Of Climate And Health Adaptation In Pacific Island Jurisdictions.
- From Crisis To Strategy: Mainstreaming Climate Risk In Health Systems Planning.
- Menu Changes Under NYC's Revised Food Standards Were Associated With A Reduction In Greenhouse Gas Emissions.
- Climate-Related Health Risks In US Hospital Community Health Needs Assessments: A Mixed-Methods Analysis.
- Aligning Health Policy With Climate Action: Evidence-Based Interventions To Decarbonize Care, Improve Climate Resilience.
- Cold-Related Illness In An Era Of Extreme Climate Events: US Trends, 1998-2022.
- Establishment and characterization of a Wolbachia (wAlbB)-infected Aedes aegypti line (Tw-Kao) for dengue control.
- Environmental and clinical rationale for the use of desflurane: a review of the literature.
- The Evolutionary-Ecological Basis of Xenophilia.
- Response of alpine grassland NPP to climate change on earth's third pole.
- Correction to "Navigating Climate Change: Exploring the Dynamics Between Plant-Soil Microbiomes and Their Impact on Plant Growth and Productivity".
- Chemical interference effects with copper-doped mordenite for dilute methane emissions mitigation.
Medicine
- Design and synthesis of mitochondria-targeted betulinic acid derivatives with antipancreatic cancer activity via ROS-mediated apoptosis and ferroptosis.
- TREM1 inhibition via LP17 alleviates secondary spinal cord injury by activating AMPKα-PINK1-parkin-dependent microglial mitophagy.
- Role of NMDAR-NMNAT in sevoflurane exposure-induced learning memory deficits.
- Unraveling the link between brain injury and enhanced artistic skills.
- Cheminformatics analysis, machine learning-based QSAR model building and virtual screening: identification of dual ROCK1 and TGFBR1 inhibitors for the treatment of cancer metastasis.
- Extending inferences from a randomized trial to trial-eligible and treatment-candidate target populations: examples of generalizability and transportability.
- Evaluating the Efficacy of Marma Therapy for Pain in Lumbar Disc Herniation With Radiculopathy: Protocol for a Randomized Controlled Trial.
- Teaching NeuroImages: Optochiasmatic Arachnoiditis: A Paradoxical Reaction After Tuberculous Meningitis Treatment.
- Intrathecal Mesenchymal Stem Cells in Progressive Multiple Sclerosis: A Randomized, Double-Blind, Placebo-Controlled Trial (SMART-MS).
- Regulation of antiviral and antitumor immunity by the BRCA1 pseudogene in human cancers.
- A ginsenoside metabolite and its derivative target PRELID3B against lung cancer cells.
- Eosinophil-derived COX-2 protects against experimental colitis through the PGE(2)-IL-22 axis.
- Prostate-specific Membrane Antigen-PET/CT in Nonprostatic Malignancies: Potential Applications in Theranostics.
- A Microchip-Based Gauge for Visual Prediction of Immunotherapy via Distance Readout of Microvesicles.
- "We Do This Work Together": Stigma Negotiation and Resistance in the Lives of Male Sex Workers Who Perform Sex Work Online in the United States.
Genomics
- Design and synthesis of mitochondria-targeted betulinic acid derivatives with antipancreatic cancer activity via ROS-mediated apoptosis and ferroptosis.
- A sugar chain-dependent two-component chemical defense in Hedera helix reveals substrate-driven β-glucosidase evolution in Apiales.
- A ginsenoside metabolite and its derivative target PRELID3B against lung cancer cells.
- The Multifaceted Challenge of Normalizing Mass Spectrometry-Based Metabolomics Data.
- Establishment and characterization of a Wolbachia (wAlbB)-infected Aedes aegypti line (Tw-Kao) for dengue control.
- VUStruct: A compute pipeline for high throughput and personalized structural biology.
- Chikungunya virus in dengue-suspected patients: Molecular evidence from the 2019 outbreak in Yangon, Myanmar.
- Syrah: a pipeline to maximize spatial transcriptomics data output.
- An Argonaute-Based Assay for Synchronous Quantification of Deaminase Catalytic Activity toward Cytidine and 5-Methylcytidine Substrates.
- Phase separation of TRNAU1AP protein sustains selenoprotein translation and promotes glioblastoma tumorigenesis.
- Sinonasal biphasic seromucinous adenocarcinomas: a report of two morphologically distinct cases with multimodal omics characterization.
- Optimisation and scale up of L-malic acid production from methanol by the methylotrophic yeast Ogataea polymorpha.
- Epigenetic Regulation of Immune Dysfunction in Chronic Prostatitis/Chronic Pelvic Pain Syndrome.
- Emerging roles of m(6)A modification in endodontic diseases: a systematic review.
- MLN2SVG: domain-aware spatially variable gene detection using contrastive variational autoencoder and multi-level neighbor search.
Immunology
- Convergent antibody solutions revealed by focused humanized repertoires.
- INDIVIDUAL ARTICLE: Clinical and Real-World Implications of IL-17 Receptor Blockade in Plaque Psoriasis and Psoriatic Arthritis With Brodalumab.
- Why do we have a vaccine for measles, but not cytomegalovirus (CMV)?
- Anti-SARS-CoV-2 response in alveolar blood sample and bronchoalveolar lavage fluid of individuals vaccinated with inactivated COVID-19 vaccines.
- Dual role of Japanese encephalitis virus fusion loop peptide antibodies in Zika virus infection.
- Characterization of atypical Ebola virus disease in ferrets.
- Optimizing hepatitis B diagnosis for mothers in a low-resource setting: A field pilot of Xpert point-of-care viral load testing in Ugandan antenatal clinics.
- The impact of non-pharmaceutical interventions on the socio-economic and demographic determinants of COVID-19 incidence: A spatial analysis of the pandemic in Toronto, Canada.
- The hydatid cyst fluid protein EgAgB8/1 demonstrates potent immunogenicity by eliciting robust humoral and cellular immune responses in mice.
- Divergent Macrophage-Regulated T cell States Determine Response to Bacillus Calmette-Guérin vaccine in High-Risk Bladder Cancer.
- Inhibiting thromboinflammation via interleukin-4 binding to platelet glycoprotein VI and suppression of thrombosis.
- Next-generation cancer immunotherapy: the promise of CAR T-Cell therapy.
- The cascade to pathogenicity in autoantibody-mediated CNS diseases.
- Comparative Strategies for Ubiquitination Detection in Mammalian Cell Lysates Using SMAD2/SMURF2 as a Model.
- Enhanced Immunogenicity and Dose-Sparing Efficacy of SelfAmplifying RNA Vaccines Against Seasonal Influenza Across Subtypes.
Microbiology
- Insights into the occurrence and biotoxicity impact of zinc oxide nanoparticles within healthcare and sanitary products.
- Oxadiazolone Derivatives: Powerful Tools to Reduce Staphylococcus aureus Infection.
- Distribution and seasonal abundance of medically important flies in Sharkia Governorate, Egypt and their associated bacteria.
- Phytase and phosphate-solubilizing Bacteria addition improves P availability and uptake by maize in low-phosphorus red soil.
- Generating Interactive 3D Spatial Visualizations of Microbial Abundance in Poultry Litter Using RStudio.
- Metagenomic Next-Generation Sequencing of Cerebrospinal Fluid for the Detection of Central Nervous System Pathogens.
- An Optimized Protocol for Candida albicans Infection in Schmidtea mediterranea to Study Fungal Pathogenesis and Host Defense.
- Investigation of Some Clinicopathologic Alterations in Cats Infected With Mycoplasma haemofelis and Candidatus Mycoplasma haemominutum in Mashhad, Iran: An Observational Cross-Sectional Study.
- Assessing the Impact of Female Genital Mutilation/Cutting on Genital Inflammation and Microbiota Among Kenyan Female Sex Workers.
- Host genetics and diet jointly shape the microbiome of Drosophila melanogaster but do not predict lifespan or age-related traits.
- Robot-Assisted Incision and Drainage for a Polymicrobial Brain Abscess.
- Probiotic potential and antioxidant, antidiabetic, and anticancer activities of goat milk-derived lactic acid bacteria.
- Management of community-acquired brain abscess and intracranial empyema: a survey of UK neurosurgical centres.
- Probiotic potential of lactic acid bacteria isolated from canine and feline microbiota: functional profiling and host-adapted benefits.
- Pediatric meningoencephalitis in the molecular diagnostic era: epidemiological insights from 1198 suspected cases in Germany between 2016 and 2024.
Evolutionary Biology
- Engineering carbon nanofiber-supported NiCo/CoNi(2)S(4) Mott-Schottky heterostructure with robust interfacial electric field for boosting oxygen evolution reaction kinetics.
- Electronic modulation influenced by interfacial Pd-O-Mo for enhanced acidic hydrogen evolution kinetics.
- A sugar chain-dependent two-component chemical defense in Hedera helix reveals substrate-driven β-glucosidase evolution in Apiales.
- Soil temperature fluctuations modulated millet agriculture evolution in Neolithic East Asia.
- Early evidence for a stable and flexible foraging niche in the evolution of Homo.
- Hierarchical Hydrogen-Bonded Organic Framework-Templated Ru-Borophene Hybrid: Synergistic Interface Engineering Toward an Efficient Oxygen Evolution Reaction in Alkaline and Marine Media.
- Source-to-sink coupling and spatiotemporal evolution during multiphase rifting: The Jurassic-Cretaceous Lishu fault depression, Southeastern Songliao Basin.
- Hydrogen Evolution Reaction on Pt Nanoaggregates by Operando Scanning Transmission Electron Microscopy: The Electron Beam, Friend or Foe?
- Burrowing Behavior and Species Recognition Predict Color Pattern Evolution in Freshwater Crayfishes.
- Evolution and Controlling Mechanisms of Methane Adsorption Thermodynamics in Coal with Varying Burial Depth in the Junggar Basin, Xinjiang.
- Recent advances in exploring the composition and evolution of the prokaryotic selenoproteome.
- Unifying Scaling Relations and Multiple Reaction Mechanisms for Screening Transition Metal-Doped Co(3)O(4) for Oxygen Evolution Reaction.
- Operando Imaging Reveals Active Wrinkled Regions for Hydrogen Evolution in MoS(2) Electrocatalysts.
- Dual-Site Substitution With Single Te Atoms in MoS(2) Boosting Hydrogen Evolution.
- Lacunary Evolution of Molybdenum Blue Clusters for Efficient and Sustainable Photocatalytic Chemodivergent C─C Coupling Reactions.
Molecular Ecology
- Timing and origins of Mexican and Central American oak diversity.
- Distribution and seasonal abundance of medically important flies in Sharkia Governorate, Egypt and their associated bacteria.
- The Influence of Zoo Habitat Settings on the Species Diversity and Assemblage of Free-Ranging Animals.
- Morphology and Phylogeny of Notospermus psittacinus comb. nov. (Nemertea: Pilidiophora: Lineidae) from Mindanao, Philippines.
- Fusing appearance and vein morphology using dual-branch deep networks for accurate medicinal plant identification.
- Evolutionary conservation hotspots: key areas for threatened Neotropical glassfrogs under climate change scenarios.
- Arctic sea-ice ridges are biomass hotspots harboring diverse microbial communities.
- Lactic acid bacteria dominate urban Bokashi: a participatory, culture-independent pilot study of microbial diversity and functional potential in household-scale food waste fermentation.
- Spatial heterogeneity and microbial terroir: balancing dispersal limitation and cultivar as drivers of microbial diversity in viticulture.
- Ulvan Polysaccharide of Ulva lactuca From Coastal Indonesia: Functional Prebiotic Properties via Enzymatic and Nonenzymatic Extraction.
- Complete Chloroplast Genomes of Ranunculus arvensis and Ranunculus laetus: Comparative Analysis and Phylogenetic Insights.
- Influence of Deadwood, Tree-Related Microhabitats, and Forest Structural Features on Saproxylic Arthropod Diversity.
- Phloxine B Staining is Compatible With High-Throughput DNA Barcoding of Meiofauna.
- Patterns and Drivers of Spontaneous Plant Diversity in Urban Wastelands Across 17 Cities on the Qinghai-Tibet Plateau.
- Dracula aguilarii (Orchidaceae, Pleurothallidinae), a new species from southwestern Ecuador and the first confirmed location for Dracula soennemarkii.
arXiv Physics
- PDF Statistical mechanics for Scrabble predicts strategy, entropy and language
- PDF Simpson's paradox explains the ubiquity of nonlinear, threshold, and complex contagions
- PDF Unsupervised Learning of Quantum Phase Transitions for Bose-Hubbard lattice systems
- PDF Magnetic loops in the solar transition region
- PDF Optimal network structure for collective performance with strategic information sharing
- PDF Combined spatially and temporally multiplexed photonic reservoir computer with a diffractively coupled VCSEL-array
- PDF Functional Connectivity-Guided Band Selection for Motor Imagery Brain-Computer Interfaces
- PDF Reconstruction of glymphatic transport fields from subject-specific imaging data, with particular emphasis on cerebrospinal fluid flow and tracer conservation
- PDF Leveraging Climate Services to Build Climate Resilient Power Systems
- PDF Beyond Bragg-Mirrors for Gravitational Wave Telescopes: A Fabrication Tolerant Hybrid Metasurface-Bragg Mirror Design
- PDF D-SHIFT: Transferring High Spatial Information from GRACE Monthly TWSA Mascon to Daily Products Using Generative Adversarial Networks
- PDF EQSANS-CLI: A natural-language, agent-ready command-line tool for small-angle neutron scattering data reduction at EQ-SANS
- PDF Knowing when to trust machine-learned interatomic potentials
- PDF The L-H transition in tokamaks: power threshold, density minimum and toroidal-field asymmetry
- PDF The role of the oceans for subseasonal prediction: insights from eddy-permitting and eddy-rich coupled forecast systems
arXiv Mathematics
- PDF Reliability, Robustness, and Resilience Modeling for Surveillance System in Advanced Air Mobility Operations
- PDF HyCOP: Hybrid Composition Operators for Interpretable Learning of PDEs
- PDF On the largest sum-free subset of the lattice cube
- PDF Univalence without function extensionality
- PDF Conjectural duality for iterated $q$-integrals on $\mathbb{P}^{1}$ minus four generic points
- PDF On the Schur multiplier of $p$-groups with abelianization $s$-elementary abelian
- PDF Smooth and stable Euler implosions
- PDF Existence of dipoles of Klein-Gordon-Zakharov system
- PDF Compactness of weighted Sobolev trace operators and non-linear Steklov problems
- PDF Recursive Maximum Likelihood Estimation for Interacting Particle Systems using Virtual Particles
- PDF The structure of gauge invariant Gaussian quantum operations on finite Fermion systems
- PDF Unbounded Weight Structures: (Re)construction and Completion
- PDF Intrinsic \(q\)-Radial Vector Derivatives and Localized Fischer Decompositions on Radial Algebras
- PDF Report on $AS$-Gorenstein Hopf algebras
- PDF The Synthetic Sierpiński Cone
arXiv Computer Science
- PDF Posterior Augmented Flow Matching
- PDF CustomDancer: Customized Dance Recommendation by Text-Dance Retrieval
- PDF HyCOP: Hybrid Composition Operators for Interpretable Learning of PDEs
- PDF When LLMs Stop Following Steps: A Diagnostic Study of Procedural Execution in Language Models
- PDF Persistent Visual Memory: Sustaining Perception for Deep Generation in LVLMs
- PDF Univalence without function extensionality
- PDF Let ViT Speak: Generative Language-Image Pre-training
- PDF Prop-Chromeleon: Adaptive Haptic Props in Mixed Reality through Generative Artificial Intelligence
- PDF Can Coding Agents Reproduce Findings in Computational Materials Science?
- PDF Generating Statistical Charts with Validation-Driven LLM Workflows
- PDF GMGaze: MoE-Based Context-Aware Gaze Estimation with CLIP and Multiscale Transformer
- PDF RunAgent: Interpreting Natural-Language Plans with Constraint-Guided Execution
- PDF A Faster Deterministic Algorithm for Fully Dynamic Maximal Matching
- PDF When RAG Chatbots Expose Their Backend: An Anonymized Case Study of Privacy and Security Risks in Patient-Facing Medical AI
- PDF Unsupervised Denoising of Real Clinical Low Dose Liver CT with Perceptual Attention Networks
arXiv Quantitative Biology
- PDF Observable Performance Does Not Fully Reflect System Organization: A Multi-Level Analysis of Gait Dynamics Under Occlusal Constraint
- PDF Functional Connectivity-Guided Band Selection for Motor Imagery Brain-Computer Interfaces
- PDF Reconstruction of glymphatic transport fields from subject-specific imaging data, with particular emphasis on cerebrospinal fluid flow and tracer conservation
- PDF Beyond Continuity: Simulation-free Reconstruction of Discrete Branching Dynamics from Single-cell Snapshots
- PDF Reduced-Precision Stochastic Simulation for Mathematical Biology
- PDF Intrinsic Brain Networks Underlying the Experience and Expression of Subclinical Anxiety
- PDF SIMON: Saliency-aware Integrative Multi-view Object-centric Neural Decoding
- PDF LNODE: latent dynamics reveal the shared spatiotemporal structure of amyloid-$β$ progression
- PDF From Birdsong to Rumbles: Classifying Elephant Calls with Out-of-Species Embeddings
- PDF Tumor containment as an anti-percolation process
- PDF Multisensory learning recruits visual neurons into an olfactory memory engram
- PDF Complex Effects of Salt on Small-Angle X-ray Scattering of BSA Originate From the Interplay of Ions and Hydration Water
- PDF On Agentic Behavioral Modeling
- PDF CRC-Screen: Certified DNA-Synthesis Hazard Screening Under Taxonomic Shift
- PDF Universal Nano-Bead Emitter Inks for Programmable Nanometric Fluorescent Architectures
arXiv Quantitative Finance
- PDF Optimal Merton's Problem under Multivariate Affine Volterra Models with Jumps
- PDF ForesightFlow: An Information Leakage Score Framework for Prediction Markets
- PDF Information Leakage at Population Scale: An Evaluation of the Polymarket Insider-Relevant Subpopulation, 2020-2026
- PDF Foresight Arena: An On-Chain Benchmark for Evaluating AI Forecasting Agents
- PDF Modeling Stock Returns and Volatility Using Bivariate Gamma Generalized Laplace Law
- PDF Measuring the risk or reducing it, that is the question: is risk measurement necessary for risk reduction?
- PDF Distributionally Robust Insurance under Bregman-Wasserstein Divergence
- PDF A Note on the Generalized Cape Cod Reserving Method
- PDF Data-Driven Stochastic Optimal Control for Intraday Electricity Trading by Renewable Producers
- PDF The Satoshi Overhang: Why the Bear Case is Bounded
- PDF Sampler-Robust Optimization under Generative Models
- PDF A Levered ETF Anomaly Explained
- PDF Fast-Vollib: A Fast Implied Volatility Library for Pythonwith PyTorch, JAX, and CUDA Fused-Kernel Backends
- PDF Learning to Spend: Model Predictive Control for Budgeting under Non-Stationary Returns
- PDF The Signal Credibility Index for Prediction Markets: A Microstructure-Grounded Diagnostic with Weighted and Time-Varying Extensions