Protein Data Bank
- 3D 10MA: Closed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a closed active site (closed TL, SI3 and RH-FL)
- 3D 10MB: Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10MC: Open2 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10MD: Open3 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
- 3D 10RX: SthK closed state at low temperature, cAMP-bound in DOPC nanodiscs
- 3D 10VB: Crystal structure of GeoCas9 HNH domain bound to S78A mutant anti-CRISPR AcrIIC1
- 3D 10VC: Crystal structure of GeoCas9 HNH domain bound to anti-CRISPR AcrIIC1
- 3D 11AD: Structural basis for high-affinity inhibitor binding to lipid kinases PIP4K2A and PIP4K2B
- 3D 11FC: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo CTGAACTT
- 3D 11GX: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo CGCAACTT
PDB Nitrogen Cycle
- 3D 11KB: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo AACTGTTG
- 3D 11LB: E.Coli DNA Topoisomerase 3 in complex with an 8mer ssDNA oligo GCAACTGG
- 3D 21JV: Alcohol Oxidase Mod2p from Ogataea methanolica
- 3D 9QSL: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z4666192264
- 3D 9SW2: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate a (composite structure)
- 3D 9SW3: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
- 3D 9SW4: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate a (composite structure)
- 3D 9SW5: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate b (composite structure)
- 3D 9SW6: Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
- 3D 9ULX: crystal structure of apo AbGHMP
PDB Photosynthesis
- 3D 21JV: Alcohol Oxidase Mod2p from Ogataea methanolica
- 3D 9QSL: Crystal Structure of Mycobacterium smegmatis thioredoxin reductase in complex with Z4666192264
- 3D 9QWT: Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state
- 3D 9SW2: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate a (composite structure)
- 3D 9SW3: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 2 substate b (composite structure)
- 3D 9SW4: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate a (composite structure)
- 3D 9SW5: Structure of the MvhAGD-HdrABC dimer of M. marburgensis under state 1 substate b (composite structure)
- 3D 9SW6: Structure of the Mvh-Hdr-Fmd complex of Methanothermobacter marburgensis (composite structure)
- 3D 9UM2: Pterocarpan Reductase GuPTR1 from Glycyrrhiza uralensis
- 3D 9RDD: Nicotinic Acid N-glucoside Reductase NaGR (A622) in complex with NADP+ and Nicotinic Acid N-glucoside
PDB PFAS Degradation
- 3D 9PPU: Beta-sandwich forming metallopeptide
- 3D 9QYO: Structural characterization of a mannose-binding site in human RNase2
- 3D 9R6D: Structural characterization of a trehalose-binding site in human RNase2
- 3D 9R6E: Structural characterization of a N-Acetyl-D-glucosamine-binding site in human RNase2
- 3D 9RAN: Structural characterization of a galactose-binding site in human RNase2
- 3D 9UIU: Crystal structure of alpha-parvin CH1 dimer
- 3D 9ULJ: Phenylquinoline derivatives as soluble epoxide hydrolase inhibitor
- 3D 9QR7: Structural characterization of a N-acetylmuramic acid-binding site in human RNase2
- 3D 9UBE: Metallo-Beta-Lactamase VIM-2 in Complex with MBL/SBL Inhibitor FB1-9
- 3D 9UE4: Serine Beta-Lactamase OXA-48 in Complex with MBL/SBL Inhibitor FB3-2
Project Gutenberg
- Emma EPUB PDF
- Thumbelina EPUB PDF
- The Romance of Lust EPUB PDF
- Anna Karenina EPUB PDF
- The Complete Poetical Works of Percy Bysshe Shelley EPUB PDF
- Romeo and Juliet EPUB PDF
- Metamorphosis EPUB PDF
- Crime and Punishment EPUB PDF
- Les Miserables EPUB PDF
- Persuasion EPUB PDF
- Pygmalion EPUB PDF
- Bleak House EPUB PDF
- Oliver Twist EPUB PDF
- The Divine Comedy EPUB PDF
- The Complete Works of Shakespeare EPUB PDF
GitHub bioRxiv
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EMOD-Hub/EMOD
105
C
Source files for building the IDM EMOD disease transmission model.
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kbaseincubator/BERIL-research-observatory
13
Jupyter Notebook
BERIL Research Observatory - Exploring microbial ecology with the KBase Data Lak...
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kr-colab/mkado
9
Python
A McDonald-Kreitman test implementation
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ohsu-cedar-comp-hub/miniMTI
5
Python
Code for a deep learning model capable of identifying optimal reduced CyCIF mark...
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MortadhaMannai/MortadhaMannai
5
Unknown
Driven by an unwavering fascination for AI's transformative power, I'm captivate...
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MunskyGroup/SSIT
5
MATLAB
Stochastic System Identification Toolkit (SSIT) to model, analyze and design sin...
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broadinstitute/CellBender
392
Python
CellBender is a software package for eliminating technical artifacts from high-t...
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neurogenomics/orthogene
56
R
𧬠o r t h o g e n e π§¬β¨β¨β¨β¨β¨β¨β¨ Interspecies gene mappingβ¨β¨β¨β¨β¨ π¦ π π± π π³ π π π π ...
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edgardomortiz/Captus
39
Python
Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
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alevax/pyviper
15
Jupyter Notebook
Porting of Protein Activity and Pathway Inference to single cell and Python.
Synthetic Biology
- Cancer cell-intrinsic SSBP4 enables tumor immune evasion by promoting cholesterol biosynthesis.
- Pharmacophore- and QSAR-guided discovery of natural product inhibitors targeting dehydrosqualene synthase in Staphylococcus aureus.
- Enhancing Heme Production in Aspergillus niger through Metabolic Engineering for the Development of Functional Fungal Meat Analogue.
- Valorization of Moroccan flora in green nanotechnology: review.
- Chemoenzymatic Synthesis with Plant Oxidases and Metabolic Engineering Enable Rapid Access to Rare Gibberellins.
- Construction of Bienzyme Self-Assembling Clusters Based on SpyCatcher/SpyTag for the Efficient Biosynthesis of Homogeneous Dextran.
- How mutagenesis and laboratory conditions affect the genome of the metal-resistant bacterium Cupriavidus metallidurans strain CH34.
- High-resolution metabolomic analysis of stool reveals expanded biomarkers of C. difficile colitis and insights into pathophysiology.
- Unlocking the secret to Staphylococcus aureus survival in serum.
- BisCEET: A Visual Browser for Biosynthetic Gene Clusters Aiding in the Identification of Natural Product Variants and Distinct Tailoring Enzymes.
- Machine-Learning-Guided Discovery of Cytochrome P450 Enzymes for Bioproduction of Jolkinolides and Other Labdane-Related Diterpenoids.
- A New Set of Optogenetic Switches in Yeast Based on the BcWCL1 Photoreceptor.
- Integrative Metabolomics and Machine Learning Approach to Uncover Scab Resistance Markers in Mature Pecan Trees.
- A Versatile tRNA-gRNA Array-Based CRISPR/Cas9 Platform Enabling Multiplex Genome Editing and Large-Fragment Engineering in Acremonium chrysogenum.
- The transcription factor MYB52 regulates salt stress tolerance in tomato by modulating ion homeostasis and proline biosynthesis.
Biotechnology
- Mechanisms of Resistance to ALS Inhibitors and Bentazone in Fimbristylis littoralis and Rapid Identification of the ALS Trp-574-Leu Mutation Using LAMP-CRISPR/Cas12a.
- Adeno-associated virus gene therapy-mediated CCR5 blockade suppresses virus replication long term in SHIV-infected macaques.
- Knockout of Mucin 1 inhibits the proliferation, migration, and invasion of human MDA-MB-231 cells by blocking autophagy flow.
- Beyond CRISPR/Cas9: emerging genome editing technologies for next-generation crop improvement.
- Cervical cancer derived extracellular vesicles expressed higher level of CD24 and suppressed the phagocytosis of macrophages.
- Thermal analysis of bioconvection flow of CNTs/water based hybrid nanofluid with gyrotactic microbes using artificial neural network.
- Generation of an Induced Pluripotent Stem Cell Line from a Duchenne Muscular Dystrophy Patient Carrying the DMD p.Ser429Ter (c.1286C>G) Nonsense Mutation.
- From haploid inducer to CMS donor: repurposing of CENH3 to create a CMS line in a single step in Brassica napus.
- IP6K1 interacts with the syndecan SDC4 to support secretory granule biogenesis in gastric chief cells.
- The Development and Impact of an Innovative Graduate Program To Promote Entry to Physiology-Related Careers: The Master of Health Science in Medical Physiology.
- Construction of Bienzyme Self-Assembling Clusters Based on SpyCatcher/SpyTag for the Efficient Biosynthesis of Homogeneous Dextran.
- The interaction between virus-bound KLF4 and host-bound PARP1 directs the localization of wild-type adeno-associated virus type 2 (wtAAV2) to cellular sites of DNA damage.
- Cefiderocol resistance mediated by mutation of the miniconductance mechanosensitive channel MscM in Klebsiella oxytoca.
- A New Set of Optogenetic Switches in Yeast Based on the BcWCL1 Photoreceptor.
- A Versatile tRNA-gRNA Array-Based CRISPR/Cas9 Platform Enabling Multiplex Genome Editing and Large-Fragment Engineering in Acremonium chrysogenum.
AI & Machine Learning
- Advanced maternal age and infertility: The role of biological aging, lifestyle, and biomarkers.
- MRI-based machine learning model to distinguish hippocampal sclerosis (HS) ILAE type 1 and no HS gliosis only in medial temporal lobe epilepsy.
- Veteran Monitoring Initiative for Noninvasive Physiology and Depression (V-MIND) Exploring Physical Activity and Mental Health in UK Veterans: Protocol for an Observational Digital Phenotyping Study.
- A New Model for Youth-Driven Community Change: Exploratory Testing of Artificial Intelligence-Supported Citizen Science.
- Open-Source Large Language Models and AI Health Equity: A Health Service Triangle Model Perspective.
- Clinical AI is Not (Yet) Trustworthy-But It Could Be.
- Rapid Noninvasive Classification of Prostatic Disease Using Paper Spray Ionization Mass Spectrometry (PSI-MS)-Based Nontargeted Metabolomics.
- Detection of Interpretable and Fine-Grained Brain Tumor Magnetic Resonance Imaging Based on Progressive Pruning: Machine Learning Model Development and Validation Study.
- Random Survival Forest Versus Elastic-Net Regularized Cox Regression for Survival Prediction in Acute Myeloid Leukemia at Distinct Treatment Time Points: Model Performance Comparison Study.
- Image-Based Deep Learning for Cataract Diagnosis: Systematic Review and Meta-Analysis.
- Assessing PANACHE's Style and Substance for Deep Learning Prognostication in Pancreatic Cancer.
- Deep Learning of Histopathology Predicts Outcomes After Surgery for Pancreatic Cancer.
- Predicting Individual Water Intake in Beef Cattle Using Longitudinal Data and Long Short-Term Memory Models.
- Errors in AI-Transformed Patient-Centered Mental Health Documentation Written by Psychiatrists: Qualitative Pre-Post Study.
- Implementing Artificial Intelligence in Radiology: Design Thinking Road Map.
Neuroscience
- Detection of Interpretable and Fine-Grained Brain Tumor Magnetic Resonance Imaging Based on Progressive Pruning: Machine Learning Model Development and Validation Study.
- Zr-MOF Nanoparticles Crafted from Conjugated Imidazolyl Carboxylic Acid Ligands for Sensitive Fluorescence Detection of 2,4-DNP and PNA.
- Evaluation of AI Chatbot Responses to a Standardized Patient Query on Myelin Oligodendrocyte Glycoprotein Antibody-Associated Disease: Cross-Sectional Content Analysis.
- Low overlap of plasma and CSF protein quantitative trait loci affects protein discovery for neurological disease.
- Neural and cardiorespiratory responses in vocalization and slow breathing: Contrasting brain and autonomic responses.
- Multimodal analysis reveals cellular diversity and divergent circuits of the zona incerta.
- [Current evidence-based approaches to the treatment of vascular cognitive impairment].
- Differential Properties of NS1 Glycoproteins in West Nile and Usutu Viruses.
- Surgical protocol for precise and high-throughput viral injections in rhesus monkey brain.
- Indicators for evaluating public speaking in adults: a scoping review.
- Xenon anesthesia: shedding light on brain dynamics and clinical niches.
- Use of D-dimer to Screen for Cerebral Pathology in ED Patients with Non-traumatic Headache and Normal Neurological Exam.
- Clinical Predictors of Intracranial Pathology in Emergency Department Patients with Non-traumatic Headache and No Neurological Deficits: Prospective Study.
- Co-release of tick-borne encephalitis virus RNA and structural proteins via virus-like particles and extracellular vesicles.
- Development of a Human 3D Immune-Competent Neurovascular Model Enabling Time-Resolved Monitoring of Neuroinflammatory Dynamics and Neuroimmune Interactions.
Climate Science
- Predicting Individual Water Intake in Beef Cattle Using Longitudinal Data and Long Short-Term Memory Models.
- Precipitation variability, fertility, and metabolic stress over 5 millennia in the ancient Andes: A bioarchaeological path analysis.
- The pace of meeting carbon emission targets alters regional climate risks.
- Climate adaptation through farmer choice: Understanding preferences for rice varieties in coastal Bangladesh.
- A game-theoretic analysis of production and coordination under combined carbon policies.
- Temporal evolution of the environmental footprints of intensive farming across England.
- US Emergency Department Use and Operations Amid Natural Disasters: A Narrative Review.
- 12-Year Case Series of Patients with Heat Illness from an Urban Hospital System in the American Southwest.
- Environmental Advocacy by the American College of Emergency Physicians: A Brief History of Climate and Sustainability Resolutions.
- From data to disposal: The role of GIS in modern solid waste management.
- The meiotic achilles' heel: vulnerability and resilience under environmental stress.
- Unraveling the synergistic effects of Bacillus cereus and different concentrations of silicon nanoparticles on wheat under rain-fed conditions of Pakistan.
- Plant litter chemistry and associated changes in microbial decomposition under drought.
- Shrub encroachment in alpine meadow diminishes ecosystem multifunctionality, but shrub removal can facilitate recovery.
- Mothers' Perceptions of Climate Change and Its Effects on Breastfeeding in TΓΌrkiye: A Qualitative Study.
Medicine
- Emerging therapies and translational advances in small cell lung cancer: Overcoming resistance.
- MRI-based machine learning model to distinguish hippocampal sclerosis (HS) ILAE type 1 and no HS gliosis only in medial temporal lobe epilepsy.
- Self-Cascading Copper-Based Nanoassemblies Trigger Bacterial Cuproptosis-Like Death and Promote Wound Healing for Diabetic Drug-Resistant Bacterial Infections.
- Complexities in evaluation and management of infectious myelopathies.
- What Are the Clinical Characteristics and Outcomes of Brucellar Spondylitis in a Nonendemic Region of Southern China?
- CD19 CAR T-Cell Therapy for Treatment of Chronic Graft-versus-Host Disease.
- Vitamin C Supplementation in Hospitalized Patients With Community-Acquired Pneumonia: Protocol for a Randomized Controlled Trial.
- A Hidden Checkpoint: Bidirectional pH Remodeling of the Immunological Synapse in Cancer, Methods, and Therapeutic Opportunities.
- Deprescribing: Reducing Harm, Enhancing Care.
- Mifepristone: Reflections on its Early Clinical Development for Medical Abortion.
- Random Survival Forest Versus Elastic-Net Regularized Cox Regression for Survival Prediction in Acute Myeloid Leukemia at Distinct Treatment Time Points: Model Performance Comparison Study.
- Liquid Biopsy Biomarkers in Patients With Metastatic Castration-Resistant Prostate Cancer Receiving Prostate-Specific Membrane Antigen Radioligand Therapy: Protocol for a Prospective, Longitudinal Multicenter Observational Study.
- Association Between Antibiotic Therapy and Treatment Effectiveness in Patients With Renal Cell Carcinoma Receiving Immune Checkpoint Inhibitors or Tyrosine Kinase Inhibitors.
- Efficacy and Safety of High-Dose Vitamin D Supplementation Combined with an Enuresis Alarm vs Alarm Alone in Children with Primary Monosymptomatic Nocturnal Enuresis: A Randomized Clinical Trial.
- Psychometric and Linguistic External Validation of the Urethral Stricture Symptom and Impact Measure and Its Association With Treatment Satisfaction and Decision Regret After Anterior Urethroplasty.
Genomics
- Integrative Molecular Analysis Reveals Determinants of Clinical Outcomes in TP53-Mutated Diffuse Large B-Cell Lymphoma.
- Shaping CDK4/6 inhibitor resistance: BRCA2 germline alterations bias towards RB1 inactivation.
- Single-cell transcriptomics of bronchoalveolar lavage reveals divergent macrophage subpopulations and trajectories in interstitial lung disease.
- Comparative genomics-based development of a LAMP assay for rapid and reliable in-field detection of Fusarium oxysporum f. sp. cubense tropical race 4.
- Proteomic and lipidomic analyses reveal molecular subtypes and potential targets in early-stage lung adenocarcinoma among non-smokers.
- Mitochondrial genome refinement and comparative phylogenetics of Parastrongyloides trichosuri (KNP strain; Nematoda: Strongyloididae) from South Africa.
- Optimising rapid prenatal exome sequencing in the NHS genomic medicine service: the EXPRESS Synopsis.
- Evaluation of Tissue from Patients with Prostate Cancer Identifies B7-H3 as an Androgen-Regulated, Broadly-Expressed, Combinatorial Therapeutic Target.
- Novel Approaches for Investigating Host Responses to HIV Infection in Ex Vivo Human Genital Tissues.
- Epigenetic alterations in head and neck cancer: a brief update.
- Spatial Mapping of Single Cells via Correlation and Importance Between Cells and Spots.
- Whole genome-sequence-based molecular characterisation of Salmonella Kentucky co-resistant to fluoroquinolones and cephalosporins isolated from children during 2017 to 2024: emergence of bla(CTX-M-55) harbouring Salmonella Kentucky in India.
- Characterizing Infiltrating Macrophages in Intracranial Aneurysm with IA Animal Models and Spatial Transcriptomics.
- Integrative systems biology and drug repurposing reveal key regulatory hubs and a prognostic signature in gastric cancer.
- Personal Utility and the Boundaries of Publicly Financed Genomics.
Immunology
- Emerging therapies and translational advances in small cell lung cancer: Overcoming resistance.
- Vaccination strategies for responding to public health emergencies of infectious diseases.
- Mim8 Bispecific Antibody Prophylaxis in Hemophilia A with or without Inhibitors.
- Generation of Monoclonal Autoantibodies From Myelin Oligodendrocyte Glycoprotein-Specific Human B Cells Using an Optofluidic-Based Platform.
- Organic Electrochemical Transistors for Real-Time Detection of Immune System Early Activation during Atezolizumab-Bevacizumab Treatment in Hepatocellular Carcinoma.
- Evaluation of AI Chatbot Responses to a Standardized Patient Query on Myelin Oligodendrocyte Glycoprotein Antibody-Associated Disease: Cross-Sectional Content Analysis.
- TCRVΞ²-targeting antibody-drug conjugates as a novel strategy to eliminate malignant T cells in T cell cancers.
- Local B cell immunity and durable memory after live-attenuated influenza intranasal vaccination of humans.
- Adeno-associated virus gene therapy-mediated CCR5 blockade suppresses virus replication long term in SHIV-infected macaques.
- Excitability as a design principle in the immune system.
- Healthcare professionals' perspectives on medicine prescribing, vaccination, and alternative therapies in pregnancy and breastfeeding: A qualitative study from Catalonia, Spain.
- Immunogenicity and Safety of the Adjuvanted Respiratory Syncytial Virus Prefusion F Protein-Based Vaccine When Co-administered With the Adjuvanted Recombinant Herpes Zoster Subunit Vaccine in Adults β₯ 50 Years of Age.
- An Ad5-vectored platform generating self-assembling VLPs elicits potent mucosal immunity against influenza A virus and SARS-CoV-2.
- Deep mining of the human antibody repertoire identifies frequent and genetically diverse CDRH3 topologies targetable by vaccination.
- Auditing the impact of social media's policy shift on anti-vaccine discourse: A large language model-driven empirical study.
Microbiology
- Self-Cascading Copper-Based Nanoassemblies Trigger Bacterial Cuproptosis-Like Death and Promote Wound Healing for Diabetic Drug-Resistant Bacterial Infections.
- Complexities in evaluation and management of infectious myelopathies.
- Association Between Antibiotic Therapy and Treatment Effectiveness in Patients With Renal Cell Carcinoma Receiving Immune Checkpoint Inhibitors or Tyrosine Kinase Inhibitors.
- Plant-associated fungi co-opt ancient antimicrobials for host manipulation.
- Comparative genomics-based development of a LAMP assay for rapid and reliable in-field detection of Fusarium oxysporum f. sp. cubense tropical race 4.
- Differential Properties of NS1 Glycoproteins in West Nile and Usutu Viruses.
- Innate lymphoid cells integrate sensing and plasticity to control fungal infections.
- The emerging role of the microbiome in bladder cancer: prognostic implications and treatment response.
- Eco-friendly cleanup: the power of nano-bioremediation in microplastic management.
- How do plant growth-promoting bacteria and auxin influence the nutrition and morphophysiology of soybean?
- Association of baseline lower respiratory tract microbiota composition and bacterial load withΒ the risk of PD-1/PD-L1 inhibitor-associated immune-related pneumonitis: A single-center prospective cohort study.
- Robust Radical-Mediated Electrical Enzyme Assay (REEA) Cartridge FET Sensor toward Practical Applications.
- Metagenomic analysis of UK retail foods finds limited evidence for associations between food production method and antimicrobial resistance gene burden.
- Tracking the early spatio-temporal dynamics of phytoplasma multiplication within its leafhopper vector.
- Computational insights into Candida albicans Malate synthase: impact of cofactor and substrates on enzyme conformation and tunnel formation.
Evolutionary Biology
- The rise and fall of HIV in Kinshasa over a century.
- Spontaneous mutation rate and spectrum are modulated by organismal fitness.
- [Alzheimer's disease: Diagnostic criteria and their evolution].
- Shining a light on camouflage evolution: Using genetic algorithms to determine the effects of geometry and lighting on optimal camouflage.
- Temporal evolution of the environmental footprints of intensive farming across England.
- Mitochondrial genome refinement and comparative phylogenetics of Parastrongyloides trichosuri (KNP strain; Nematoda: Strongyloididae) from South Africa.
- The Evolution of Organoids: From Discovery to Cutting-Edge Applications.
- Evolution of sexually dimorphic plumage patterns in estrildid finches.
- Morphology and Histology of Major Organ Systems in the Killifish Esmaeilius sophiae (Teleostei: Aphaniidae).
- Epitaxial Growth of Nickel Oxide on Lattice-Matched Tungsten Nitride Support for Electrocatalytic Hydrogen Evolution.
- Diversity in evolutionary dynamics.
- Synergistic enhancement of hydrogen evolution on MoS(2) by sulfur vacancy and transition metal doping: a DFT and machine learning study.
- Devonian northward drift of the Qaidam-Kunlun continent constrains the early evolution of the Paleo-Tethys Ocean.
- Case Report: S-100 negative primary esophageal malignant melanoma: surgical challenges and phenotypic evolution.
- Harnessing Benzoyl-Urea Secondary-Sphere Hydrogen-Bonding to Enhance Oxygen Evolution Catalysis by Cobalt Corroles.
Molecular Ecology
- The rise and fall of the world's greatest marine biodiversity hotspot.
- Unlocking biodiversity data with robotic imaging and AI-driven transcription of natural history collections.
- Resource availability structures microbial competition through genomic niche partitioning.
- Paleolatitude.org 3.0: A calculator for paleoclimate and paleobiology studies based on a new global paleogeography model.
- A predictive approach to integrating connectivity into landscape scale protected areas planning.
- Desert treasures: a comprehensive review of the diversity, phytochemistry, ethnobotany, and conservation of thar desert flora.
- Illegal small-scale mining (galamsey) in Ghana: environmental pollution and remediation approaches-a review.
- METRIN-KG: A knowledge graph integrating plant metabolites, traits, and biotic interactions.
- Wavyleaf basketgrass (Oplismenus undulatifolius) invasion is associated with changes in soil microbial communities.
- Shrub encroachment in alpine meadow diminishes ecosystem multifunctionality, but shrub removal can facilitate recovery.
- Phylogeographic Patterns Are Strongly Associated With Biogeographic Patterns in the Irano-Anatolian Global Biodiversity Hotspot.
- Habitat-and-Site Dependent Variations on Crustaceans Associated With Ecklonia radiata Holdfast Along the South African Wild Coast.
- Field Survey of Freshwater Invertebrates Reveals That Several Groups Are Potential Carriers of the Fungal Pathogen Batrachochytrium dendrobatidis.
- Editorial: Native yeasts: isolation, characterization, and food industry applications.
- Sex chromosome identification and genome curation from a single individual with SCINKD.
arXiv Physics
- PDF Observation-Guided Neural Surrogate Learning for Scientific Simulation Emulation: A Single-Gauge Flood-Inundation Proof of Concept
- PDF Optimized thermal control of a dual-wavelength-resonant nonlinear cavity
- PDF $\texttt{cuSkyrmion}$: A CUDA-OpenGL framework for interactive simulation and visualization of nuclei as Skyrmions
- PDF Shear band patterns by boundary integral equations
- PDF Embedded underwater front-end electronics for the 3-inch photomultipliers in the JUNO experiment
- PDF Discovery of Sparse Invariant Subgrid-Scale Closures via Dissipation-Controlled Training for Large Eddy Simulation on Anisotropic Grids
- PDF Revealing Laser and Electron Beam Evolution in 10-GeV-class Laser-Plasma Accelerators
- PDF A unified quantum random walk model for internal crystal effects in dynamical diffraction
- PDF Predicting challenging phase transitions with Bayesian active learning
- PDF Quantum-Inspired Robust and Scalable SAR Object Classification
- PDF Numerically-Exact Quantum-Simulation Approach for Two-Dimensional Spectroscopy of Open Quantum Systems
- PDF Quantum sensing-enabled deuterium NMR spectroscopy with nanoscale sensitivity at low magnetic fields
- PDF Hierarchical Reconstruction of Time-arrow from Multi-time Correlations
- PDF Sub-keV energy calibration of CONUS+ via 71Ge M-shell neutron activation
- PDF Coherence Revivals and Lifetime Extension of Polariton Condensates by Mirror-Mediated Self-Feedback
arXiv Mathematics
- PDF Permutations that strongly avoid 132
- PDF $H^2$ Stabilization of the $2$-D and $3$-D Heat Equation via Modal Decomposition
- PDF Teacher Forcing as Generalized Bayes: Optimization Geometry Mismatch in Switching Surrogates for Chaotic Dynamics
- PDF Stable $2$-systoles, scalar curvature and spin$^c$ comass bounds
- PDF A structure theorem for sets with doubling $4+Ξ΄$
- PDF Dynamics, Random Products, and Ultrametric Geometry in Kiselman's Semigroup
- PDF Every finite horizon Sinai billiard map has a unique measure of maximal entropy
- PDF Arboretum.hs: Symbolic manipulation for algebras of graphs
- PDF Asymptotic height of Plancherel random trees
- PDF Asymptotically sharp embedding of $A_\infty$ into $A_p$ for flat weights and applications to PoincarΓ©-Sobolev inequalities
- PDF Implications of weak convergence rates of Markov transition kernels
- PDF The slack data of the recording tableaux in the quantum Littlewood-Richardson map determine its inverse: some applications
- PDF Quantum channels preserving sigma-additivity and Ulam measurable cardinals
- PDF Efficient boundary elements for the Smoluchowski diffusion equation
- PDF Non-uniqueness of nonlinear Markov processes in the sense of McKean associated with parabolic PDEs
arXiv Computer Science
- PDF Recursive Multi-Agent Systems
- PDF DV-World: Benchmarking Data Visualization Agents in Real-World Scenarios
- PDF Credit Limits beyond Full Collateralization in Decentralized Micropayments: Incentive Conditions
- PDF How Fast Should a Model Commit to Supervision? Training Reasoning Models on the Tsallis Loss Continuum
- PDF Make Any Collection Navigable: Methods for Constructing and Evaluating Hypergraph of Text
- PDF A paradox of AI fluency
- PDF Teacher Forcing as Generalized Bayes: Optimization Geometry Mismatch in Switching Surrogates for Chaotic Dynamics
- PDF Carbon-Taxed Transformers: A Green Compression Pipeline for Overgrown Language Models
- PDF Toward a Functional Geometric Algebra for Natural Language Semantics
- PDF Pythia: Toward Predictability-Driven Agent-Native LLM Serving
- PDF TSN-Affinity: Similarity-Driven Parameter Reuse for Continual Offline Reinforcement Learning
- PDF Variational Neural Belief Parameterizations for Robust Dexterous Grasping under Multimodal Uncertainty
- PDF Three Models of RLHF Annotation: Extension, Evidence, and Authority
- PDF Conditional misalignment: common interventions can hide emergent misalignment behind contextual triggers
- PDF Robust Deepfake Detection: Mitigating Spatial Attention Drift via Calibrated Complementary Ensembles
arXiv Quantitative Biology
- PDF From lab to outbreak: experimental mosquito extrinsic incubation period distributions shape dengue epidemic dynamics
- PDF A modelling perspective on mosquito infectiousness: time-varying transmission competence in arbovirus vector
- PDF Bayesian Rate Inference for Sequence Motif Dynamics in Systems of Reactive Nucleic Acids
- PDF A geometry aware framework enhances noninvasive mapping of whole human brain dynamics
- PDF One-shot emergency psychiatric triage across 15 frontier AI chatbots
- PDF PhyloSDF: Phylogenetically-Conditioned Neural Generation of 3D Skull Morphology via Residual Flow Matching
- PDF Learning Structure, Energy, and Dynamics: A Survey of Artificial Intelligence for Protein Dynamics
- PDF A Combinatorial Optimisation Approach to Multi-factorial Gap-filling in Genome-scale Metabolic Models (GEMs)
- PDF On a Keller-Segel type equation to model Brain Microvascular Endothelial Cells growth's patterns
- PDF Learning biophysical models of gene regulation with probability flow matching
- PDF Equation Learning for multiscale models of infectious diseases
- PDF Independent-Component-Based Encoding Models of Brain Activity During Story Comprehension
- PDF Generative diffusion models for spatiotemporal influenza forecasting
- PDF Homology-based Morphometry of Brain Atrophy: Methods and Applications
- PDF Quantifying the effect of phenotype on clustering behaviour in melanoma: from monoculture to co-culture
arXiv Quantitative Finance
- PDF A Motif-Based Framework for Decomposing Risk Spillovers
- PDF Corporate Bond Yield Curve Modeling: A Rating-Based Regime-Switching Generalized CIR Approach
- PDF Yau's Affine-Normal Descent for Large-Scale Unrestricted Higher-Moment Portfolio Optimization
- PDF ValueAlpha: Agreement-Gated Stress Testing of LLM-Judged Investment Rationales Before Returns Are Observable
- PDF Implied Volatility Expansions for VIX Options in Forward Variance Models
- PDF Cylindrical Projections of Occupied Diffusions
- PDF Efficient Multivariate Kelly Optimization Reveals Sigmoidal Scaling Laws
- PDF Comonotonic improvement under feasibility constraints
- PDF An Explicit Solution to Black-Scholes Implied Volatility
- PDF The Anatomy of a Decentralized Prediction Market: Microstructure Evidence from the Polymarket Order Book
- PDF Price as Focal Point: Prediction Markets,Conditional Reflexivity, and the Politics of Common Knowledge
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