Space
- εpsilon [ESA]
Protein Data Bank
- 3D 10NU: Structure of kRas G12C bound to Inhibitor 13ab
- 3D 10NV: Structure of kRas G12C Bound to Inhibitor 13ba
- 3D 10OO: FGFR2 mutant D650V with compound 4 (AZD3463)
- 3D 10OQ: FGFR2 mutant D650V with compound 6
- 3D 10OU: FGFR2 mutant D650V with compound 12
- 3D 11SZ: Antibody (1B2) Bound Rifamycin Synthetase Module 2
- 3D 12FK: Ancestral Reconstruction of a Homing Endonuclease
- 3D 12GB: High Resolution Structure of Monomorphic AB1-40 Fibrils
- 3D 12HH: Ancestral Reconstruction of a Homing Endonuclease
- 3D 12IS: Crystal structure of a SnoaL-like domain-containing protein from Mycobacterium ulcerans (Zinc Bound)
PDB Nitrogen Cycle
- 3D 22EY: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum SjTGR-WT
- 3D 22FC: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation SjTGR-U597C
- 3D 22FD: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation in complex with NADPH
- 3D 22FE: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation in complex with GSH
- 3D 22FF: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation in complex with auranofin
- 3D 25BV: Crystal structure of P450cam mutant-F87R
- 3D 7HK8: Crystal Structure of N-methylhydantoinase in complex with 1-methylimidazolidine-2,4-dione, C2221 form
- 3D 7HK9: Crystal Structure of N-methylhydantoinase in complex with ZN2+ and ADPNP
- 3D 9GZD: Androgen Receptor ligand-binding domain in complex with 11-ketodihydrotestosterone
- 3D 9I88: Structure of the wild-type Staphylococcus aureus 70S ribosome complexed with clincelin
PDB Photosynthesis
- 3D 22EY: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum SjTGR-WT
- 3D 22FC: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation SjTGR-U597C
- 3D 22FD: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation in complex with NADPH
- 3D 22FE: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation in complex with GSH
- 3D 22FF: Crystal structure of thioredoxin gluthathione reductase from Schistosoma japonicum with the U597C mutation in complex with auranofin
- 3D 9I88: Structure of the wild-type Staphylococcus aureus 70S ribosome complexed with clincelin
- 3D 9I89: Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin
- 3D 9OZ9: Flavobacterium johnsoniae 70S initiation complex with Shine-Dalgarno-less mRNA.
- 3D 9OZN: Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 1.
- 3D 9OZZ: Flavobacterium johnsoniae 70S initiation complex with rpsU mRNA containing Shine-Dalgarno sequence. State 2.
PDB PFAS Degradation
- 3D 9QR7: Structural characterization of a N-acetylmuramic acid-binding site in human RNase2
- 3D 9UBE: Metallo-Beta-Lactamase VIM-2 in Complex with MBL/SBL Inhibitor FB1-9
- 3D 9UE4: Serine Beta-Lactamase OXA-48 in Complex with MBL/SBL Inhibitor FB3-2
- 3D 9UEM: Metallo-Beta-Lactamase VIM-2 in Complex with MBL/SBL Inhibitor FB1-12
- 3D 9YWN: Protein Structure of the First Glycoside Hydrolase Family 30, Subfamily 12 Endoxylanase
- 3D 9MQM: Cryo-EM structure of a membrane transport protein
- 3D 9NHZ: Cryo-EM structure of a membrane transport protein
- 3D 9U9L: Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Trp185Tyr/His280Ala with 2-fluoro-3-phenylpropanoic acid
- 3D 9ZWK: High-resolution cryo-EM structure of KdpFABC in the E1 state in lipid nanodisc
- 3D 9ZWL: High-resolution cryo-EM structure of KdpFABC in the E1-ATP state in lipid nanodisc
Project Gutenberg
- The Romance of Lust EPUB PDF
- Persuasion EPUB PDF
- The Complete Works of Shakespeare EPUB PDF
- A Doll's House EPUB PDF
- The Fall of the House of Usher EPUB PDF
- Thumbelina EPUB PDF
- Peter Pan EPUB PDF
- The War of the Worlds EPUB PDF
- Bleak House EPUB PDF
- The Wonderful Wizard of Oz EPUB PDF
- David Copperfield EPUB PDF
- Oliver Twist EPUB PDF
- Siddhartha EPUB PDF
- The Jungle Book EPUB PDF
- Romeo and Juliet EPUB PDF
GitHub bioRxiv
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flyark/LIVIA
5
HTML
LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize pro...
-
mims-harvard/ToolUniverse
1272
Python
Democratizing AI scientists with ToolUniverse
-
edgardomortiz/Captus
39
Python
Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
-
openvax/vaxrank
63
Python
Ranked vaccine peptides for personalized cancer immunotherapy
-
UKHD-NP/proteopy
16
Python
An AnnData-based framework for integrated proteomics analysis
-
ClawBio/ClawBio
725
HTML
🦖 ClawBio — The first bioinformatics-native AI agent skill library. Local-first....
-
Brandes-Lab/VEP-eval
9
Jupyter Notebook
Evaluation of multiple genomic language model for clinical VEP
-
jhuapl-bio/taxtriage
69
Python
TaxTriage is a Nextflow workflow designed to agnostically identify and classify ...
-
klangenf/QuantMeta
5
R
QuantMeta determines the absolute abundance of targets in metagenomes spiked wit...
-
cmdcolin/awesome-genome-visualization
1065
TypeScript
A list of interesting genome browser and genome visualization programs
Synthetic Biology
- The interaction between PII and NAGK regulates arginine biosynthesis in the green microalga Haematococcus pluvialis.
- Cell-in-Shell Metacells in Single-Cell Nanoencapsulation.
- Insect-resistant soybean genotypes accumulate rutin and its O-methylated derivative narcissin, a more potent flavonol targeting Anticarsia gemmatalis digestive and detoxification enzymes and reducing larval survival.
- N-Acetylornithine Depletion in Bone Marrow Biopsy: A Novel Microenvironment-Specific Hallmark for Multiple Myeloma Diagnosis.
- Glycerol monolaurate attenuates necrotic enteritis in broilers by improving gut-liver health and remodeling the gut microbiota.
- Selenium‑based nanotherapeutics promote healing of infected diabetic wounds via photothermal‑driven macrophage immunometabolic reprogramming and the NRF2/HIF‑1α axis.
- Silymarin and serotonin, individually and synergistically, enhance fenugreek resistance to salt stress by modulating pathways involved in chlorophyll biosynthesis, defense system, hormonal regulation, ion redox balance, and diosgenin production.
- Comparative phytochemical profiling and meta‑analysis of public transcriptomic datasets uncover species‑ and organ‑specific patterns of flavonoid and phenolic biosynthesis in Ferula species.
- Recent Advances of Controllable Production of PHA Biosynthesis in Chain Length, Monomers and Special Functional Groups.
- Bioreactor-Induced Compression in Scaffolds for the Enhancement of Cartilage Regeneration: A Systematic Review.
- PRMT5 inhibition sensitizes B-cell lymphoma cells to ferroptosis.
- Kombucha inoculated fermentation reshapes microbial ecology and flavour metabolism in Yunnan Arabica coffee.
- Vitamins and skin aging.
- Biosynthesis of the Africane-type sesquiterpenoid Ophioceric acid involves a cytochrome P450 mediated Enone formation.
- Targeting the liver for longevity.
Biotechnology
- Mapping and Functional Characterization of Homologous Genes AhSUCA06 and AhSUCA16 Underlying Sucrose, Oil and Protein Contents in Peanut (Arachis hypogaea L.).
- WFS1 gene delivery rescues visual function in a mouse model of Wolfram syndrome.
- Recent Advances of Controllable Production of PHA Biosynthesis in Chain Length, Monomers and Special Functional Groups.
- Tools and tactics for studying alternative splicing.
- New gene-editing approaches for β-hemoglobinopathies.
- SLC33A1 exports oxidized glutathione to maintain endoplasmic reticulum redox homeostasis.
- Systemic delivery of AAV-GFM1 corrects COXPD1 molecular alterations in Gfm1(R671C/-) mice.
- Structural, functional and patient-reported 24-month outcomes of voretigene neparvovec in Portuguese patients with RPE65-associated disease.
- Nicotinamide N-methyltransferase as a therapeutic target in taxane-resistant castration-resistant prostate cancer.
- Metabolite import by SLC33A1 is required for ATF6 activation during endoplasmic reticulum stress.
- Rapid quantitative bioanalysis using LC-HRIM-QTOFMS with flexible sample delivery and variable traveling wave profiles.
- Unified Primer Enabled Detection (UPED) system for Magnaporthe oryzae infecting rice: A comparative study from conventional PCR to CRISPR Cas12a based detection systems.
- Gene Therapy for Aging: Current Evidence and Future Directions.
- Evolutionary differentiation of duplicated hoxb5 paralogs orchestrates calcium signaling and contractility.
- Emerging advantages of nano delivery systems in enhancing CAR-T/CRISPR-Cas9 mediated cancer therapeutics.
AI & Machine Learning
- Bounded Supportive Companionship: How Chinese Young Adults Seek Emotional Support from Generative AI Chatbots.
- Ultrasound-MRI Fusion Deep Learning Radiomics Nomogram: Refining Prognostic Stratification for Triple-Negative Breast Cancer Treated With Neoadjuvant Chemotherapy.
- copick: An open dataset interface and toolkit for collaborative annotation and analysis of cryo-electron tomography data.
- Use of Machine Learning to Identify Markers of Risk for Fragile X-Associated Tremor/Ataxia Syndrome: A Preliminary Analysis.
- Synergizing Genome Editing and Artificial Intelligence for Predictive Crop Design.
- A deep learning algorithm for automatic 3D segmentation and classification of the sheep placenta in magnetic resonance images.
- Non-invasive assessment of left atrial pressure in patients with heart failure: head to head comparison of novel machine-learning based echocardiographic tool with a wireless pulmonary artery sensor.
- Use of Deep Learning Models in the Diagnosis of Proptosis Through Orbital Magnetic Resonance Imaging.
- Generalized multi-symplectic PINN method and its application in quantum tunneling simulations.
- Development of an ab initio learned model of electron deposition range in deuterium-tritium plasmas through time-dependent density functional theory calculations and machine learning.
- Time-embedded convolutional neural networks for modeling plasma heat transport.
- Operator learning augmented physics-informed neural networks for partial differential equations exhibiting sharp features.
- Estimating classical mutual information between quantum subsystems with neural networks.
- Machine-learning-derived protocols for information-based work extraction from active particles.
- Training oscillator Ising machines to assign the dynamic stability of their equilibrium points.
Neuroscience
- Posterior Segment Involvement in Subacute Sclerosing Panencephalitis: Clinical Features and Outcomes.
- Evolution of mesenchymal stem cell therapies for traumatic brain injury: A decade of advances, mechanisms, and translational prospects.
- Diagnostic Criteria and Management of MELAS and Stroke-Like Episodes: Consensus-Based Statements.
- Effects of Mediterranean diet and stress-reduction interventions during pregnancy on fetal brain development detected using magnetic resonance imaging.
- Targeted Inhibition of MEGF10-Mediated Astrogliosis Reduces Glial Scar Formation and Promotes Neurofunction Recovery in Mice After Stroke.
- Intrauterine Transfusions in Fetuses Affected by Parvovirus B19: Complications, Challenges and Outcomes.
- Antithrombotic Strategies Targeting the Coagulation Pathway and Incident Covert Brain Infarction: A Systematic Review and Meta-analysis of Randomized Trials.
- Sex differences in cerebrovascular function across an aerobic exercise intervention in older adults using MRI: Results from the Brain in Motion study.
- Clinical case of a pregnant woman with arteriovenous malformation, hemorrhagic venous infarcts and epileptic seizures: a case report.
- Prenatal bisphenol A exposure perturbs sex-dependent transcriptomic regionalization of autism-associated genes in the developing brain.
- Stroke risk after traumatic brain injury in older adults : impact of smoking and alcohol consumption.
- Independent component analysis of brain network alterations associated with cognitive impairment in coal workers' pneumoconiosis.
- China approves brain chip to overcome paralysis.
- Beyond a Moment in Time: Rethinking Capacity and Compassion in Addiction Psychiatry.
- Neural correlates of social cognition in stroke and traumatic brain injury: A systematic review.
Climate Science
- The epigenetic set-point: metabolic and redox gating of developmental transitions in plants.
- Grazing Stocking Rate and Rainfall Jointly Regulate Soil Methane Uptake in a Temperate Meadow Steppe, but Do Not Reverse Net Methane Emissions.
- Evaluating the Environmental Impact of Clinical Research: A Full Life Cycle Analysis of a French Academic Randomised Clinical Trial.
- Adaptive Introgression in the Context of Climate Adaptation.
- Decoupled Climatic Drivers of Tree and Ground-Layer Carbon Uptake in Mountain Ecosystems Around the World.
- Climate as the Main Driver of Large-Scale Genetic Patterns and Connectivity in the Expanding Golden Jackal.
- Multidimensional Recovery of Young Secondary Forests in Human-Modified Tropical Landscapes.
- Temperature-Related Changes in Avian Nestling Provisioning: A Global Analysis.
- Attitudes, knowledge, practices, and perceived barriers on sustainability actions among Italian anesthesiologists-intensivists: a nationwide survey.
- Climate change anxiety, hope, and pro-environmental behavioral intention during pregnancy: a cross-sectional study.
- Climate change and crop-feeding herbivores.
- Diversification across the Australian Monsoonal Tropics: Comparing phylogeographic and demographic patterns within and between species of Cryptoblepharus skinks.
- Warming temperatures and shifting precipitation patterns may exacerbate pest damage in North American forests.
- Assessing food security and environmental quality under policy stringency and geopolitics using counterfactual and machine learning approaches.
- Identification of drought-tolerant ideotype in wheat using multi-trait genotype-ideotype distance index (MGIDI) and comprehensive evaluation value.
Medicine
- A Clinical-Radiomics Nomogram Predicts Early Tumor Necrosis After Transarterial Chemoembolization for Hepatocellular Carcinoma.
- Evolution of mesenchymal stem cell therapies for traumatic brain injury: A decade of advances, mechanisms, and translational prospects.
- Evaluating the Environmental Impact of Clinical Research: A Full Life Cycle Analysis of a French Academic Randomised Clinical Trial.
- Evidence-Based Recommendations on the Use of Inclisiran in Patients With Chronic Kidney Disease.
- Impact of Therapeutic Ultrasound on Metabolic Hormone Release from Thyroid Gland.
- Molecular cancer prevention: Intercepting disease.
- Irish traveller women and sexual assault: Patterns of engagement with sexual assault treatment units.
- RAMP-UP: Pharmacist-Led Methadone Titration for Hospitalized Patients With Opioid Use Disorder.
- Smart Wound Dressings and the Biological Parameters They Monitor: A Scoping Review.
- Effects of Mediterranean diet and stress-reduction interventions during pregnancy on fetal brain development detected using magnetic resonance imaging.
- What are the experiences of people with psychosis, their carers and staff in inpatient mental healthcare services in the United Kingdom? A systematic review and meta-ethnography.
- The Role of the C3a-C3aR Pathway in Diseases: Latest Research Advances.
- Targeted Inhibition of MEGF10-Mediated Astrogliosis Reduces Glial Scar Formation and Promotes Neurofunction Recovery in Mice After Stroke.
- Body Image and Paranoia-Findings From a Large-Scale Community Sample Using Network Analysis.
- Systemic Treatment and Outcome in Erythrodermic Psoriasis: A Retrospective Multicenter Study.
Genomics
- The epigenetic set-point: metabolic and redox gating of developmental transitions in plants.
- Mapping and Functional Characterization of Homologous Genes AhSUCA06 and AhSUCA16 Underlying Sucrose, Oil and Protein Contents in Peanut (Arachis hypogaea L.).
- Adaptive Introgression in the Context of Climate Adaptation.
- Climate as the Main Driver of Large-Scale Genetic Patterns and Connectivity in the Expanding Golden Jackal.
- Diel carbon buffering by floridoside enables source-sink resilience in the intertidal red alga Pyropia haitanensis.
- Temporal Shifts in Gut Microbiota and Host Immunity During Chronic Diarrhea in an Infant Rhesus Macaque: A Longitudinal Case Study Based on Multi-Omics.
- m(5)C RNA modification in gastrointestinal cancers: a comprehensive review from molecular mechanism to clinical implication.
- Whole-transcriptome analysis of Aortic Stenosis reveals dysregulated RNA networks, immune cell infiltration, and NADK2 as a candidate regulator.
- A recurrent sequencing artifact on Illumina sequencers with two-color fluorescent dye chemistry and its impact on somatic variant detection.
- From parasite-induced immune activation to neuroinflammation and behavioral dysfunction: convergent mechanisms across protozoa and helminths: a review.
- Single-cell transcriptomics identify mechanical-memory-associated cell states in metastatic HR(+) breast cancer.
- Integrated serum proteomic and liver genomic analyses identify molecular signatures associated with metabolic dysfunction-associated steatotic liver disease: a multi-cohort study.
- Inhibiting lactylation for efficient treatment of renal fibrosis through targeting nanomedicine of renal lactate accumulation in obstructed kidney.
- Integration of human and mouse single-cell transcriptomes of the developing cerebellum nominates cells-of-origin for group 3 and 4 medulloblastoma.
- Whole genome sequencing reveals interbay population structure of Saccharina latissima (sugar kelp) in western Iceland.
Immunology
- Spesolimab for generalized pustular psoriasis: A prospective study with a 6-month-follow-up.
- A meta-analysis of perceived infectability, germ aversion, disgust and outgroup perceptions: Evaluating research on the behavioural immune system.
- Adrenaline, Anaphylaxis, and Experimental Evidence.
- Global Vaccine Confidence at a Crossroads: Immunisation Coverage Declines, Misinformation, and the Future of Vaccine Policy.
- Age-Dependent Differences in Canakinumab Safety: A Comprehensive Pharmacovigilance Analysis Using the FAERS Database.
- Thalamic homeostatic transcriptomic signatures are altered in a mouse model of cholestatic liver injury and are mitigated by systemic TNF neutralization.
- COVID-19 vaccination hesitancy in pediatrics: a systematic review.
- Construction and evaluation of an engineered autonomously lysing Salmonella system coupled with self-assembled nanoparticles as a vaccine platform for antigen delivery.
- "A single viral video can undo months of health education": social media, trust, and vaccine hesitancy in wartime Ukraine.
- Covalent conjugation of TLR9 agonists to phospholipids enhances mRNA-LNP delivery efficiency and dendritic cell cross-priming.
- "You Could Have Prevented It!": attributions of responsibility toward COVID-19 unvaccinated vs. vaccinated individuals.
- Targeting angiopoietin-like protein 3 and interleukin-1β alleviated liver and kidney injury through attenuation of lipotoxicity and regulation of glycolipid metabolism in db/db mice.
- Integrating In-vitro Permeability Assays within PBPK Modeling to Predict CNS Distribution of Standard and Engineered Antibodies.
- Anti-Sez6L2 antibody-associated autoimmune cerebellar ataxia: a rare case with implications of rituximab therapy.
- Enhancing success rates in therapeutic antibody design through generative models.
Microbiology
- Cross-kingdom sRNA Ta_sRNA1 silences PRIM2 to fine-tune Arabidopsis immunity during symbiosis with Trichoderma atroviride.
- Apolipoprotein E Polymorphism and Reproductive Patterns Among Postreproductive Women.
- The Gut Microbiome as a Therapeutic Target in Alopecia Areata: Not Yet Part of the Patient Treatment Plan.
- Comments on "Gut Microbiome Signatures Differ in Cirrhosis With and Without Hepatocellular Carcinoma in a Southeast Asian Cohort".
- Temporal Shifts in Gut Microbiota and Host Immunity During Chronic Diarrhea in an Infant Rhesus Macaque: A Longitudinal Case Study Based on Multi-Omics.
- Forgotten in the tropics: research on Culex mosquitoes is overshadowed in malaria and dengue-endemic regions.
- Maternal-prenatal gut microbiome-systemic metabolome perturbations and T(H)2-skewed immunity link to offspring gut microbiome disruption and atopic dermatitis susceptibility.
- Bacterial communities in Thai ticks: revealing geographical and methodological gaps in surveillance-a 25-year scoping review.
- The functional evaluation of Pichia pastoris hydrolysate as a protein source partial replacement of soybean meal in diets of growing-finishing pigs.
- Identification of Campylobactercoli as a key pathogen in Jinhua piglet diarrhea and its the probiotic control by Enterococcus faecium.
- Metabolomic signatures suggest altered bile acid and energy metabolism in CRB1- retinopathies.
- Omics-informed insights into biochar-Trichoderma interactions in plant-soil systems: mechanisms of defense and context-dependent responses.
- Redox and physiological responses of wheat to wheat streak mosaic virus under liposomal bionanocomposite seed treatment.
- Ribosomal protein RPSA is a promising target for the prevention of Streptococcus suis serotype 2.
- Genetic Potential for N₂O Metabolism in Tree Tissues: Insights From Nitrogen Cycling Gene Prevalence and nosZ Diversity Across Tree Species.
Evolutionary Biology
- Evolution of mesenchymal stem cell therapies for traumatic brain injury: A decade of advances, mechanisms, and translational prospects.
- Non-unitary time evolution via the Chebyshev expansion method.
- Examining the evolution of phase-space elements for C.elegans locomotion.
- Modeling language evolution using a spin glass approach.
- Single-cell omics data-driven decoding of tumor clonal evolution through reinforcement learning.
- Reconstructing mammalian lifespan evolution reveals strong phylogenetic effects and lifespan-associated genes.
- Comparative mitogenomics of freshwater snails of the genus Biomphalaria (Gastropoda: Planorbidae) and new insights into mitochondrial genome evolution in Hygrophila.
- Iron ion enables photocatalytic hydrogen evolution from methanol.
- Comparative analysis of stress wave propagation and rock damage evolution in water versus air medium decoupled blasting.
- The effect of the fitness gradient on fixation probability.
- The cost of cure: cancer therapies sculpt somatic evolution and signaling landscapes in normal tissues.
- From Disordered to Ordered: Nanoscale Spectroscopy Reveals Structural Evolution of Amyloid Beta 40 Fibrils.
- New insights into the evolution of serum calprotectin and urinary CD163 in ANCA-associated vasculitis during remission: An exploratory study.
- Viral Mimicry by Repeats Mediates Evolutionary Trade-offs in Cancer-Immune Co-Evolution.
- Morphological and molecular evidence of Peircei-group Babesia in brown boobies (Sula leucogaster) from the Brazilian coast.
Molecular Ecology
- Adaptive Introgression in the Context of Climate Adaptation.
- Integrated Reanalysis of Global Riverine Fish eDNA Datasets Shows Robustness and Congruence of Biodiversity Conclusions.
- Multidimensional Recovery of Young Secondary Forests in Human-Modified Tropical Landscapes.
- Grazing-driven ontogenetic aging and reproductive shifts in a dominant Stipa grass mediate community reorganization.
- Whole genome sequencing reveals interbay population structure of Saccharina latissima (sugar kelp) in western Iceland.
- Spatiotemporal assessment of surface water dynamics and quality in Harike Wetland, Punjab, using multi-sensor remote sensing and field observations.
- Chemical pollution and bioaccumulation of trace elements in aquatic ecosystems in the Cavally River basin (Ity-Floleu area, Côte d'Ivoire): case of the fish Coptodon walteri and Chrysichthys teugelsi.
- Diversity and antimicrobial products of culturable coral-associated actinomycetes in Hainan.
- A Global Dataset of Bathymetric Features Identified with Prominence and Isobaths Analysis.
- Biotic carbon stocks across trophic levels in the shallow littoral zone - the role of biodiversity and environmental drivers.
- Macrofaunal diversity and secondary production in kelp holdfasts (Phaeophyceae) within a climatic transition zone.
- Environmental Fluctuations Are Insufficient to Explain High Coral Biodiversity: A Test of Five Storage Effect Pathways.
- Integrating SolVES and social media analytics to quantify social value spatial patterns and driving mechanisms in mega-scale green spaces.
- Extensive heterozygosity and genetic exchange among natural populations of Leishmania species.
- Dynamic stressor regimes drive shifts in biofilm-associated parasites.
arXiv Physics
- PDF Superstatistical Approach to Turbulent Circulation Fluctuations
- PDF Motif-based filtrations for persistent homology: A framework for graph isomorphism and property prediction
- PDF Studies of the Modular COsmic Ray Detector (MCORD) using an automatic temperature control loop to maintain constant gain parameters of semiconductor SiPM photomultipliers
- PDF Blocking of 2D bistable reaction-diffusion fronts by obstacles
- PDF 3D Finite Element-Based Multiphysics Simulation of a Shape Memory Alloy Hybrid Composite Module
- PDF Picometer-Scale Spatial Symmetry Breaking in Active Transmissive Metasurfaces
- PDF Minimum energy and photon content in PT symmetric metamaterials
- PDF Deformation of Bacterial Cell Membranes by Action of Metal Surface under Plasmon Resonance Condition
- PDF Toward Accurate RIXS Spectra at Heavy Element Edges: A Relativistic Four-Component and Exact Two-Component TDDFT Approach
- PDF Asymptotic gauge-invariant Hybrid High-Order method for magnetic Schrödinger equations
- PDF Roadmap on Attosecond Science
- PDF Optical Modulation Due to Energy Exchange Between Photonic and Exciton Modes in the Intermediate Coupling Regime
- PDF Laboratory evidence of electron pressure anisotropy driving plasmoid mediated magnetic reconnection
- PDF On nonlinear saturation of toroidal Alfvén eigenmode due to thermal plasma nonlinearities
- PDF Thermodynamic Geometry of Relaxation
arXiv Mathematics
- PDF Erdős's diameter conjecture for separated distances fails in high dimensions
- PDF Diameter bounds for arbitrary finite groups and applications
- PDF Ensembles of random quantum states tunable from volume law to area law
- PDF Borel--Bernstein and Hirst-type Theorems for Nearest-Integer Complex Continued Fractions over Euclidean Imaginary Quadratic Fields
- PDF Generalization of Pearl's Front-Door Criterion
- PDF Matrices over Finite Fields of Characteristic 2 as Sums of Diagonalizable and Square-Zero Matrices
- PDF Structural interpretability in SVMs with truncated orthogonal polynomial kernels
- PDF Cloning is as Hard as Learning for Stabilizer States
- PDF Motif-based filtrations for persistent homology: A framework for graph isomorphism and property prediction
- PDF Computing the free energy of quantum Coulomb gases and molecules via quantum Gibbs sampling
- PDF Detecting Regime Transitions in Dynamical Systems via the Mixup Euler Characteristic Profile
- PDF Convexity and concavity in Banach lattices
- PDF A matroidal twist on a formula of Brion
- PDF Tube-Based Robust Data-Driven Predictive Control
- PDF Blocking of 2D bistable reaction-diffusion fronts by obstacles
arXiv Computer Science
- PDF Bidirectional Cross-Modal Prompting for Event-Frame Asymmetric Stereo
- PDF LeapAlign: Post-Training Flow Matching Models at Any Generation Step by Building Two-Step Trajectories
- PDF TokenLight: Precise Lighting Control in Images using Attribute Tokens
- PDF MM-WebAgent: A Hierarchical Multimodal Web Agent for Webpage Generation
- PDF Heuristic Search for Minimum-Distance Upper-Bound Witnesses in Quantum APM-LDPC Codes
- PDF RAD-2: Scaling Reinforcement Learning in a Generator-Discriminator Framework
- PDF Generalization in LLM Problem Solving: The Case of the Shortest Path
- PDF Diagnosing LLM Judge Reliability: Conformal Prediction Sets and Transitivity Violations
- PDF Think in Latent Thoughts: A New Paradigm for Gloss-Free Sign Language Translation
- PDF Super-Constant Weight Dicke States in Constant Depth Without Fanout
- PDF AnimationBench: Are Video Models Good at Character-Centric Animation?
- PDF Benchmarking Optimizers for MLPs in Tabular Deep Learning
- PDF Reed--Muller Codes Achieve the Symmetric Capacity on Finite-State Channels
- PDF How Do LLMs and VLMs Understand Viewpoint Rotation Without Vision? An Interpretability Study
- PDF AD4AD: Benchmarking Visual Anomaly Detection Models for Safer Autonomous Driving
arXiv Quantitative Biology
- PDF Unity and Diversity of Intracellular pH Maintenance Mechanisms
- PDF Cell-cell adhesion cannot sustain extended follower streams in a minimal non-local model of leader-follower migration
- PDF Goxpyriment: A Go Framework for Behavioral and Cognitive Experiments
- PDF PUFFIN: Protein Unit Discovery with Functional Supervision
- PDF Robust Evaluation of Neural Encoding Models via ground-truth approximation
- PDF Absolute Concentration Robustness of Non-Redundant Zero-One Networks with Conservation Laws
- PDF Synchronized disease and behavioural dynamics in weakly coupled populations
- PDF Mamba-SSM with LLM Reasoning for Biomarker Discovery: Causal Feature Refinement via Chain-of-Thought Gene Evaluation
- PDF Combining Bayesian and Frequentist Inference for Laboratory-Specific Performance Guarantees in Copy Number Variation Detection
- PDF Working Memory in a Recurrent Spiking Neural Networks With Heterogeneous Synaptic Delays
- PDF A deep learning framework for glomeruli segmentation with boundary attention
- PDF Continual Learning for fMRI-Based Brain Disorder Diagnosis via Functional Connectivity Matrices Generative Replay
- PDF BOAT: Navigating the Sea of In Silico Predictors for Antibody Design via Multi-Objective Bayesian Optimization
- PDF A generative model for bipartite gene-sharing networks
- PDF Modeling of Self-sustained Neuron Population without External Stimulus
arXiv Quantitative Finance
- PDF LR-Robot: An Human-in-the-Loop LLM Framework for Systematic Literature Reviews with Applications in Financial Research
- PDF The Acoustic Camouflage Phenomenon: Re-evaluating Speech Features for Financial Risk Prediction
- PDF Higher-order ATM asymptotics for the CGMY model via the characteristic function
- PDF Interpretable Systematic Risk around the Clock
- PDF Against a Universal Trading Strategy: No-Arbitrage, No-Free-Lunch, and Adversarial Cantor Diagonalization
- PDF Topological Complexity and Phase Space Stability: A Persistent Homology Approach to Cryptocurrency Risk
- PDF Which Voices Move Markets? Speaker Identity and the Cross-Section of Post-Earnings Returns
- PDF Forecasting Oil Prices Across the Distribution: A Quantile VAR Approach
- PDF Emergence of Statistical Financial Factors by a Diffusion Process
- PDF A Decomposition Method for LQ Conditional McKean-Vlasov Control Problems with Random Coefficients
- PDF When Forecast Accuracy Fails: Rank Correlation and Decision Quality in Multi-Market Battery Storage Optimization
- PDF Risk-Constrained Kelly for Mutually Exclusive Outcomes: CRRA Support Invariance and Logarithmic One-Dimensional Calibration
- PDF A Counterfactual Diagnostic Framework for Explaining KS Deterioration in Credit Risk Model Validation
- PDF OOM-RL: Out-of-Money Reinforcement Learning Market-Driven Alignment for LLM-Based Multi-Agent Systems
- PDF A Herding-Based Model of Technological Transfer and Economic Convergence: Evidence from Central and Eastern Europe