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  • UKHD-NP/proteopy 5 Python

    An AnnData-based framework for integrated proteomics analysis

  • gumadeiras/squeakout 7 Python

    SqueakOut: Autoencoder-based segmentation of mouse ultrasonic vocalizations

  • marcpinet/citracer 8 Python

    đź’¬ Trace citation chains for any concept across research papers and render them a...

  • zhengxinchang/isopedia 28 Rust

    Simultaneous exploration of thousands of long-read transcriptomes by read-level ...

  • BirolLab/ntSynt-viz 56 Python

    Multi-genome synteny block visualization tool

  • RomeroLab/alphafast 115 Python

    AlphaFast: ultra-high-throughput AlphaFold3 inference with MMSeqs2-GPU

  • Lucaslab-Berkeley/Leopard-EM 16 Python

    Two-Dimensional Template Matching implemented in Python

  • nwamsley1/Pioneer.jl 20 Julia

    CLI toolkit for fast analysis of DIA proteomics experiments and in silico librar...

  • jhuapl-bio/taxtriage 66 Python

    TaxTriage is a Nextflow workflow designed to agnostically identify and classify ...

  • openvax/vaxrank 63 Python

    Ranked vaccine peptides for personalized cancer immunotherapy

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