Protein Data Bank
- 3D 10CW: Crystal structure of Thermoproteus neutrophilus Rpp30
- 3D 10CX: Crystal structure of Pyrobaculum calidifontis Rpp30
- 3D 10CY: Crystal structure of Pyrobaculum islandicum Rpp30/Pop5 complex
- 3D 10CZ: Crystal structure of Pyrobaculum aerophilum L7Ae
- 3D 10DA: Crystal structure of Pyrobaculum islandicum L7Ae
- 3D 10ED: CbrXA SLC5-STAC domains
- 3D 10JA: Cryo-EM structure of Gi-coupled GPR84 in complex with OX04539
- 3D 10JB: Cryo-EM structure of Gi-coupled GPR84 in complex with OX04539 and PSB-16671
- 3D 10OJ: The crystal structure of apo phosphofructokinase from Escherichia coli
- 3D 10RN: Human RNase PNK bound to ATPyS ligand
PDB Nitrogen Cycle
- 3D 11LL: Particulate methane monooxygenase in membrane arrays
- 3D 12EM: Crystal structure of a B1,3-Glucosyltransferase (B3GLCT) reveals an unusual mode of substrate recognition by a two-domain GT-A fold glycosyltransfe...
- 3D 12HG: Crystal Structure of the N-terminal Domain of the Nsp8 from SARS-CoV2
- 3D 26SK: Crystal structure of MAIT A-F7 TCR-MR1-uric acid
- 3D 26SL: crystal structure of MAIT A-F7 TCR-MR1-xanthosine
- 3D 26WD: Structure of honeybee alpha-amylase belonging to glycoside hydrolase family 13 subfamily 15
- 3D 30QN: Cryo-EM Structure of Native Monomeric Quinol-Dependent Nitric Oxide Reductase from Achromobacter xylosoxidans.
- 3D 31DE: Human Pyridoxine-5'-phosphate oxidase in complex with PLP-isoniazid in its active site
- 3D 31DF: human Pyridoxine-5'-phosphate oxidase in complex with PLP-phenelzine in its active site
- 3D 31DG: human Pyridoxine-5'-phosphate oxidase in complex with PLP-carbidopa in its active site
PDB Photosynthesis
- 3D 31DE: Human Pyridoxine-5'-phosphate oxidase in complex with PLP-isoniazid in its active site
- 3D 31DF: human Pyridoxine-5'-phosphate oxidase in complex with PLP-phenelzine in its active site
- 3D 31DG: human Pyridoxine-5'-phosphate oxidase in complex with PLP-carbidopa in its active site
- 3D 9LUR: Crystal structure of the C-terminal ATPase domain of M. tuberculosis EccA1 enzyme
- 3D 9PW5: Hybrid Rubisco containing Arabidopsis thaliana large subunit and Oryza sativa small subunit RbcS1
- 3D 9PWP: Hybrid Rubisco containing Arabidopsis thaliana large subunit and Limonium gibertii small subunit
- 3D 9PXD: M20A Mutant of E. coli Dihydrofolate Reductase Complexed with Folate and Nicotinamide Adenine Dinucleotide Phosphate (oxidized form)
- 3D 9Q0R: Hybrid Rubisco containing Arabidopsis thaliana large subunit and Sorghum bicolor small subunit
- 3D 9Q1T: 1.9 Angstrom crystal structure of the tungsten-dependent aldehyde oxidoreductase WOR83 from Haloferax volcanii
- 3D 9Q3Q: Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-T...
PDB PFAS Degradation
- 3D 12HG: Crystal Structure of the N-terminal Domain of the Nsp8 from SARS-CoV2
- 3D 9IBM: OleP mutant F84Q in complex with LCA
- 3D 9I7R: Crystal structure of MnmA D100C mutant from Streptococcus pneumoniae with [4Fe-5Se] cluster
- 3D 29MM: Crystal structure of SHP2 in complex with I-0436650
- 3D 9RO9: Human alpha3 Na+,K+-ATPase in the Na+-bound E1-ATP state
- 3D 9ROA: Human alpha3 Na+,K+-ATPase in the Na+-occluded E1P-ADP state
- 3D 9ROD: Human alpha3 Na+,K+-ATPase in the Na+-occluded E2P state
- 3D 9ROE: Human alpha3 Na+,K+-ATPase in the outward open E2P state
- 3D 9ROF: Human alpha3 Na+,K+-ATPase in the Na+-bound E1-ATP state obtained under turnover conditions
- 3D 9ROG: Human alpha3 Na+,K+-ATPase in the Na+-occluded E1P-ADP state obtained under turnover conditions
Project Gutenberg
- Aesop's Fables EPUB PDF
- Narrative of the Life of Frederick Douglass EPUB PDF
- Mansfield Park EPUB PDF
- Flatland EPUB PDF
- The Kama Sutra EPUB PDF
- Adventures of Huckleberry Finn EPUB PDF
- The Yellow Wallpaper EPUB PDF
- The Adventures of Tom Sawyer EPUB PDF
- War and Peace EPUB PDF
- On the Origin of Species EPUB PDF
- The Adventures of Sherlock Holmes EPUB PDF
- Moby Dick EPUB PDF
- The Complete Poetical Works of Percy Bysshe Shelley EPUB PDF
- Wuthering Heights EPUB PDF
- Meditations EPUB PDF
GitHub bioRxiv
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MortadhaMannai/MortadhaMannai
5
Unknown
Driven by an unwavering fascination for AI's transformative power, I'm captivate...
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wanunulab/NanoCortex
5
Python
NanoCortex is a unified agentic system for nanopore sequencing analysis from wan...
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aipoch/open-science
3266
TypeScript
Open Science is an open-source, local-first, model-agnostic AI research workbenc...
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BirolLab/ntRoot
13
Python
🌳 Scalable ancestry from genomic data
-
kitzeslab/bioacoustics-model-zoo
67
Python
Pre-trained models for bioacoustic classification tasks
-
embodied-computation-group/Cardioception
34
Jupyter Notebook
Python Cardioception Package - Measuring interoceptive performance with Psychopy
-
fairdataihub/SODA-for-SPARC
32
JavaScript
Simplifying data curation for researchers funded by the NIH SPARC initiative
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Traitome/oxo-flow
17
Rust
(Ready) Yet Another bioinformatics workflow engine https://traitome.github.io/ox...
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api-evangelist/api-evangelist-network
29
HTML
API Evangelist Network — independent third-party profile of a public API surface...
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MunskyGroup/SSIT
6
MATLAB
Stochastic System Identification Toolkit (SSIT) to model, analyze and design sin...
Synthetic Biology
- D53-SPL14/17-WOX11 module modulates rice crown root development adaptations to changes in nitrogen availability.
- Two bHLH transcription factors regulate PbGME1 expression to modulate ascorbate biosynthesis and salt tolerance in pear.
- Brucella deploys multiple type IV effectors that simultaneously control bacterial survival and host inflammatory cell death.
- Revisiting plant-microbe interaction mechanisms for developing efficient biostimulants.
- Complete telomere-to-telomere genome assembly of Guazuma ulmifolia uncovers evolutionary mechanisms, drought adaptation, and flavonoid biosynthesis.
- Armadillo repeat only gene VlARO confers resistance to Botrytis cinerea by promoting guaijaverin accumulation in grapevine.
- Construction of a novel reporter strain indicating inhibition of cell wall biosynthesis.
- Application and progress of synthetic biology technology in amino acid production.
- Light-induced carotenogenesis enhances growth and high hydrostatic pressure tolerance in a deep-sea bacterium by reducing intracellular ROS.
- Correction to: The NPR7-TGA6-MYB1 module promotes anthocyanin biosynthesis and integrates salicylic acid and strigolactone signaling in apple.
- Reprogramming of carbon metabolism drives fatty acid biosynthesis during avocado mesocarp development.
- Nano-Iron Alleviates Carbohydrate Deficiency and Improves Yield of Soybean Under Saline-Alkali Stress by Regulating Photosynthetic Carbon Assimilation.
- Phytohormone-microbiome interactions and epigenetic regulation of plant stress responses and priming.
- Combinatorial metabolic engineering of Mycobacterium neoaurum LY-2 for efficient androstenedione production from phytosterols.
- Genome-integrated engineering of Escherichia coli Nissle 1917 enables sustained gut-local biosynthesis of 5-hydroxytryptophan.
Biotechnology
- The emerging roles of non-coding RNAs in cancer.
- Doing more with less in hemophilia B gene therapy.
- Durability of CRISPR-Cas9 Gene Editing Targeting ANGPTL3 with CTX310.
- RNAi: the next wave of green agriculture, challenges, and bridging the translational gap.
- The landscape and trajectory of global CRISPR therapeutics.
- Double-stranded DNA donors and CRISPR-Cas9 for universal correction of mutations causing cystic fibrosis in human airway cells.
- Structural insights into Cas9 inhibition by AcrIIA17 via bridge helix interaction.
- NF2 lacking exon 11 induced by antisense gene therapy is able to partially recover merlin deficiency in NF2-SWN iPSC-derived spheroid model.
- Photophysical Investigation of Coumarin Solubilization in Polyethylene Glycol Mediated by a 1,2,4-Triazolium Protic Ionic Liquid.
- Roctavian withdrawal: exploring the gap between innovation and healthcare system readiness in hemophilia A gene therapy.
- Biomarker changes in cerebral adrenoleukodystrophy after gene therapy or allogeneic hematopoietic cell transplant.
- Engineering hematopoietic stem and progenitor cells to generate red blood cells as viral traps against HIV-1.
- AAVR disruption as a producer-cell engineering strategy for enhanced supernatant-based recovery of selected AAV serotypes.
- Isothermal miRNA Detection via Ligation-Dependent CRISPR/Cas13a Activation.
- Host determinants of exo-rAAV production revealed by extended gene expression analysis in HEK293 cells.
AI & Machine Learning
- Are Limited Electronic Medical Record Follow-Up Data Sufficiently Useful for Validating the Performance of Survival Prediction Models?
- Machine learning algorithms for post-Kasai biliary atresia-like cholestasis recurrence: a conceptual framework integrating multi-omics and environmental nanoparticle exposure.
- Machine learning-assisted prediction of swelling behavior in sodium alginate/triethylene glycol/acrylic acid pH-responsive biodegradable hydrogels.
- Generative Artificial Intelligence in Mental Health: A Guide for Primary Care Providers.
- Infection with Western equine encephalitis virus causes severe regional glial reactivity and neurodegeneration in the hippocampus with progressive accumulation of amyloid-β.
- Ferroelastic hysteresis, shear modulus softening, and the tetragonal↔cubic transition in davemaoite.
- Mental bootstrapping enables human-level concept learning in self-supervised deep models.
- Wafer-scale SOT-MRAM for analog crossbar array applications.
- Machine learning framework for predicting ESDD on high-voltage glass insulators with SHAP-based feature optimization.
- Coming of Age With Generative Artificial Intelligence: The High Stakes of Automating Adolescent Development.
- ASPIRE: Accurate alternative splicing prediction from limited RNA sequencing data and a minimal gene set.
- Artificial intelligence-driven study selection in systematic reviews of randomized controlled trials, emulated trials and economic evaluation studies using large language models.
- Dual-flow convolutional neural network for automatic measurement of left ventricular ejection fraction and global longitudinal strain in echocardiography.
- Comparative machine learning models for predicting the compressive strength of ultra-high-performance concrete.
- Exploration of acetylation-related biomarkers in osteoarthritis through bioinformatics analysis.
Neuroscience
- Mitochondria in SARS-CoV-2 infection: Immune interactions and molecular approaches in the Post COVID-19 condition.
- ERAS Protocol Elements and Neurosurgery-Specific Considerations: A Narrative Review.
- Impact of Concomitant Cervical Anterolisthesis on Surgical Outcomes in Cervical Spondylotic Myelopathy: A Multicenter Prospective Study.
- ASPIRE: Accurate alternative splicing prediction from limited RNA sequencing data and a minimal gene set.
- Pterygopalatine Ganglion Cell Death as an Underrecognized Mechanism in Dry Eye Syndrome: A Hypothesis with Special Attention to Diabetic Etiology.
- Diagnostic and Surgical Challenges of Cauda Equina Syndrome in Elderly Patients with Diabetes Mellitus: A Systematic Review and Meta-Analysis of Clinical, Radiological, and Surgical Outcomes.
- Association of Vitamin D Status with Neurobiological Biomarkers in Healthy Elderly Population.
- Protocol for pH correction of FRET-based fluorescent biosensor imaging in dissociated Drosophila neurons.
- Functionally identified neuronal assemblies robustly encode stimuli and are structurally delineated by inhibition.
- Core activation program and selective regional responsiveness of microglia during aging and parabiosis.
- Sexual Dimorphism in the Microglial Inflammatory Response After Traumatic Brain Injury.
- Preserved anticorrelated brain networks and prognostic stratification after traumatic brain injury.
- TensorPat: Explainable artificial intelligence for EEG-based violence-stimulus classification.
- Intraoperative neuromonitoring alerts during surgery for congenital spinal deformity: prevalence, risk factors, and outcomes in a prospective study of 100 patients.
- Polyneuropathy Assessment and Treatment Patterns in Patients with Hereditary Transthyretin Amyloidosis.
Climate Science
- Cropland type shapes arbuscular mycorrhizal fungi (AMF) population density and species diversity in Northwest Ethiopia.
- Sustainable engineered cementitious composites incorporating recycled materials: Experimental validation and life cycle assessment.
- Delivery Riders at the Crossroads of Occupational Health, Climate Change, and Algorithmic Management.
- Revisiting plant-microbe interaction mechanisms for developing efficient biostimulants.
- Complete telomere-to-telomere genome assembly of Guazuma ulmifolia uncovers evolutionary mechanisms, drought adaptation, and flavonoid biosynthesis.
- Detecting ringed seal vocalizations using deep learning.
- Adaptive Variation Amid High Gene Flow Across a Broad Latitudinal Gradient in the Reef-Building Honeycomb Worm, Sabellaria alveolata.
- Oak masting under climate change: when spatially heterogeneous shifts in flowering phenology reshape pollen limitation.
- Phytohormone-microbiome interactions and epigenetic regulation of plant stress responses and priming.
- Straw return and organic fertilization promote soil organic carbon sequestration through microbes.
- Animal organoids as models for integrated One Health research.
- Embedding indigenous and local knowledges with one health: a roadmap for convergence and synergies.
- Environmental and Evolutionary Correlates of Extinction Risk in a Global Biodiversity Hotspot.
- Marine heatwaves suppress nutrient utilization and reproductive flexibility in humpback whales.
- Preventing heat-related illness in people with severe and persistent mental illness: a quality improvement educational intervention.
Medicine
- The emerging roles of non-coding RNAs in cancer.
- Early lenvatinib dose intensity is associated with survival in super-older adults (≥80 years) with hepatocellular carcinoma: a real-world comparison with atezolizumab-bevacizumab.
- Successful Therapeutic Plasma Exchange in Refractory Anti-MDA5-Positive Dermatomyositis and Rapidly Progressive-Interstitial Lung Disease: A Case Report.
- Effect of Multimodal Pre-emptive Analgesia with Pregabalin Versus Naproxen on Post-Thoracotomy Pain and Opioid Consumption: A Randomized Clinical Trial.
- Impact of clear aligner (Invisalign®) treatment and occlusal changes on the masticatory function and temporomandibular disorders: A cross-sectional study.
- Transglutaminase 2 regulates vimentin-dependent proteostasis during macrophage activation.
- The structure of the dopamine D(3) receptor bound to cariprazine reveals principles for partial agonists with designed pharmacology.
- Structure-function analysis of the FCRL5-IgG1 Fc complex reveals an unappreciated pathway for B cell modulation by Fc-attenuated IgG.
- Maladaptive immune-fibrotic axis drives impaired long bone regeneration under mechanical instability.
- A spatially resolved implantable microdevice for multiplexed in situ screening of engineered cellular therapies in solid tumors.
- Platelet-derived serotonin drives age-related lung pathology in SARS-CoV-2 infection.
- Knowledge graph-guided multiple sclerosis identification and therapeutic trend analysis: Real-world evidence from two large healthcare systems.
- Oxaloacetate damages mitochondria by perturbing MIC60-dependent membrane remodeling.
- NECTIN2 depletion impairs migration and invasion in MDA-MB-231 breast cancer cells through LIMK1-associated cytoskeletal remodeling.
- A cross‑sectional analysis of vitamin D status and associated factors in children recovering from severe acute malnutrition in Zambia and Zimbabwe.
Genomics
- Comprehensive genetic characterization of adult BCR::ABL1-negative B-ALL by Optical Genome Mapping and Targeted NGS.
- The emerging roles of non-coding RNAs in cancer.
- Evolutionary Rate Covariation Across Malaria Parasite Species Enables Inference of Protein Interactions.
- ASPIRE: Accurate alternative splicing prediction from limited RNA sequencing data and a minimal gene set.
- Ecological theory sheds light on plasmid diversity and dynamics.
- Cell Type-specific Isoform Function Prediction by Multiplex Heterogeneous Network.
- Placental changes with assisted reproductive technologies: Insights from the transcriptomic and proteomic profiling of multiple species.
- Core activation program and selective regional responsiveness of microglia during aging and parabiosis.
- Transcriptomic Signatures of Microglial Phagocytosis Reveal Diagnostic Markers and Immune Landscape in Alzheimer's Disease.
- Complete telomere-to-telomere genome assembly of Guazuma ulmifolia uncovers evolutionary mechanisms, drought adaptation, and flavonoid biosynthesis.
- Comparative transcriptomics reveals hormone signaling and MADS-box genes in divergent development of inflorescences and tendrils in grapevine lateral shoots.
- From operating room to circuit mechanisms: Clinical basic science partnerships as a strategic model for human neuroscience.
- Fine-scale structural diversification among closely related Legionella pneumophila isolates from a bath-associated environmental reservoir.
- Oxygenaging: A Physiological Framework for Geroscience.
- AGG repeat expansion and aggregation of BIN1 in multiple system atrophy.
Immunology
- Antibody Fc receptor CD16a mediates natural killer cell activation via mechanotransduction of piconewton forces.
- Structure-function analysis of the FCRL5-IgG1 Fc complex reveals an unappreciated pathway for B cell modulation by Fc-attenuated IgG.
- Decomposing socioeconomic inequalities in COVID-19 vaccination uptake among Nigerian women of reproductive age: A further analysis of population-based data.
- Planned pregnancy after remission of anti-MDA5 antibody-positive dermatomyositis-associated interstitial lung disease: a case report with more than 4 years of postpartum follow-up.
- Hybrid Nanostructure-Functionalized Nano-doped Optical Fiber Probe for Rapid and Sensitive Triclocarban Monitoring.
- SADS-CoV nucleocapsid protein antagonizes DAD1-mediated STING activation to prevent cytosolic DNA sensing.
- Targeting pro-senescent PTGS2(+) macrophages alleviates chondrocyte senescence and osteoarthritis progression.
- Adverse reactions following upper arm vs. buttock DTaP vaccination in children: A retrospective observational study in Wuxi, China, 2020-2024.
- Repositioning omalizumab in Dermatology: emerging indications and mechanism-based Therapeutic Insights.
- Toward a Vaccine Against Multidrug-Resistant Elizabethkingia anophelis: Comprehensive Immunoinformatics-Based Design of a Multi-Epitope Vaccine and mRNA Construct.
- Protein Analyte Sensing with an Outer Membrane Protein G (OmpG) Nanopore.
- Safety and Effectiveness of Inebilizumab in Patients with Neuromyelitis Optica Spectrum Disorder: Interim Analysis of a Post-marketing Surveillance in Japan.
- FGF23 - A hormone produced by bone and has many faces.
- Pharmacokinetic-Pharmacodynamic Modelling of Repeated Ocrelizumab Dosing in Relapsing-Remitting Multiple Sclerosis.
- Real-World Effectiveness and Safety of Bimekizumab for Moderate-to-Severe Hidradenitis Suppurativa: A Multicenter Retrospective Study from the Italian Landscape HS (IL-HS).
Microbiology
- Rice stripe virus exploits the miR159a.2-OsGTL1 module to manipulate growth-defense trade-offs.
- Decoding BIG: how one protein influences multiple pathways.
- Post-Sepsis Outcomes: Risk Factors for 90-Day Mortality and Infection Site-Pathogen Similarity in Recurrent Sepsis.
- Cryo-EM structures of Cdr1 reveal snapshots of substrate transport and diverse inhibitor recognition.
- Intestinal fructose catabolism promotes obesity and insulin resistance via ileal lacteal remodeling.
- Brucella deploys multiple type IV effectors that simultaneously control bacterial survival and host inflammatory cell death.
- Proteobacteria with chemosynthetic potential are highly prevalent in the gills of Hypoplectrus reef fishes.
- Structural insights into the outer membrane proteins PorA, OMP50 and Cj0034c from native Campylobacter jejuni membranes.
- Enteric Pathogens in children under five with diarrhoea in a rotavirus vaccinated population in Coastal Ghana, 2023.
- ACTA2 AS1/miR 2278 axis modulates inflammation and epithelial barrier integrity in pediatric Mycoplasma pneumoniae pneumonia.
- Activity of Lactobacillus gasseri strain LLG1 and its exopolysaccharides in an inflammatory cell model and on Candida albicans proliferation.
- SADS-CoV nucleocapsid protein antagonizes DAD1-mediated STING activation to prevent cytosolic DNA sensing.
- Structural insights into fosfomycin efflux by a streptococcal ABC transporter.
- Toward a Vaccine Against Multidrug-Resistant Elizabethkingia anophelis: Comprehensive Immunoinformatics-Based Design of a Multi-Epitope Vaccine and mRNA Construct.
- Real-World Therapy with Eravacycline for Complex Infections Caused by Carbapenem-Resistant Pathogens with a Focus on Patients with Severe Burns.
Evolutionary Biology
- Integrative Oncology à La Française. Evolution and Distinctive Features.
- Simple birth-death-mutation models predict some-but not all-aspects of the experimental evolution of antibiotic resistance.
- Evolution of road safety lead agencies in low- and middle-income countries.
- Evolution of cooperation on graphs with degree-dependent inertia.
- Sound localization acuity, use of cues, and vision in rabbits and five rodents: implications for evolution.
- Pre-Cambrian origin of envelope-carrying retrotransposons in metazoans.
- Local Trade-Offs Shape Flower Size Evolution Across Arabidopsis thaliana Distribution.
- Antagonistic co-evolution throughout the herpesvirus life cycle.
- Carbon Isotopic Characteristics and Evolution of Coal-Measure Gas in the Yushe-Wuxiang Block, Qinshui Basin, China.
- Facile and Fast Microwave-Assisted Synthesis of Metalated PCN-222 for Light-Driven Hydrogen Evolution Reaction.
- Triple Threat: Elucidating Evolution Under Antibiotic, Metal, and Phage Pressure in Escherichia coli.
- Oncolytic viruses in cancer therapy development: the evolution of cell culture models in preclinical research.
- Cu-bridged polyoxovanadate coordination polymers assembled by distinct N-heterocyclic ligands for efficient photocatalytic hydrogen evolution.
- Phylogenomic analysis of ultraconserved elements clarifies relationships and morphological evolution in Cryptoplacoidea (Mollusca: Polyplacophora).
- The role of satellite DNAs in repeatome organization and sex chromosome evolution in the owl monkey Aotus infulatus and congeneric species.
Molecular Ecology
- Trophic regulation constrains ecosystem carbon accumulation under global change.
- Geospatial and Google Earth Engine-based assessment of land use and land cover dynamics and its impacts on ecosystem health and biodiversity in the Bale Mountains, Ethiopia.
- Adaptive Variation Amid High Gene Flow Across a Broad Latitudinal Gradient in the Reef-Building Honeycomb Worm, Sabellaria alveolata.
- Animal organoids as models for integrated One Health research.
- Embedding indigenous and local knowledges with one health: a roadmap for convergence and synergies.
- Environmental and Evolutionary Correlates of Extinction Risk in a Global Biodiversity Hotspot.
- Genomic diversification between aposematic and cryptic phenotypes of Oophaga granulifera (Anura: Dendrobatidae).
- Rewilding the upper Klamath River Basin: rapid recolonization of Chinook salmon following the world's largest dam removal.
- Whose Knowledge Counts? Gendered Knowledge and Community-Based Pollinator Conservation in Semi-Arid Ghana.
- Identifying Green Infrastructure to Prioritise Conservation and Restoration in a Peatland Dominated Landscape.
- Influence of plant cover on the long-term dynamics of an arbuscular mycorrhizal fungal SynCom in a semi-arid Mediterranean environment.
- Forests in protected areas worldwide face increased thermal pressure from urbanization.
- Marine biodiversity was greater in the presence of ecosystem engineers throughout the Phanerozoic.
- Costing global biodiversity framework delivery in megadiverse Australia.
- Altitudinal gradient and anthropogenic disturbance alter soil quality index and biomass carbon in Banj Oak (Quercus leucotrichophora) forests of Garhwal Himalaya, India.
arXiv Physics
- PDF Detuning- and Stark-robust Rydberg gates
- PDF High-order stabilized matrix-free simulation of rotating mixing devices using the Mortar Element Method
- PDF Stochastic transport of a Goldstone mode in a self-organized atomic crystal
- PDF Real-Time Emergence of Charge-Transfer-to-Solvent States from Core Excitation
- PDF How well can Diffusion Models learn Lagrangian-Tracer Statistics in Non-reciprocal Turbulence?
- PDF Temperature dependence of the charge density from first principles: application to the (222) forbidden reflection in silicon
- PDF Dynamical slowdown, bottlenecks, and multiscaling in Voigt-regularised turbulence
- PDF Ultra-Low-Loss Silicon Nitride on Sapphire for Broad-Transparency Nonlinear and Quantum Photonics
- PDF Evaluating Quantum Kernel Methods for Track-Based Classification in High-Energy Physics
- PDF The heavy Fermi polaron I: the Lithium-Cesium experiment
- PDF Hyperuniformity as a unifying organizational principle across diatom architectures
- PDF Accelerating Optical Photon Simulation in DUNE with Opticks
- PDF From the November Revolution toward the Millennium
- PDF Benchmarking of Fast and Interpretable UF Machine Learning Potentials
- PDF Energy transfer and scale organisation in dense canopy turbulence
arXiv Mathematics
- PDF Koszul duality and Morita categories
- PDF Proof of the AGT Conjecture at Generic $β$
- PDF Towards the Global Torelli Theorem
- PDF Graded Ehrhart theory for hypersimplices
- PDF Free Novikov-Zinbiel algebra
- PDF Disjoint and nearly disjoint sums of matrix multiplication tensors and their centroids
- PDF Scalar curvature on Kähler blow-ups and systolic inequalities
- PDF Closing the gap and settling the problem of queens on an $n\times n$ board, each attacking at most one other
- PDF Monotonicity of the propagation speed with respect to the diffusion in a Lotka-Volterra competition-diffusion system
- PDF Leading term strandings for webs
- PDF High-order stabilized matrix-free simulation of rotating mixing devices using the Mortar Element Method
- PDF Algorithms for Robbins' Problem using Markov Decision Processes
- PDF Value distribution of multiplicative functions along linear fractional sequences
- PDF Refutation of the Non-Cancelling-Intersections Conjecture
- PDF Very good gradings on structural matrix rings
arXiv Computer Science
- PDF UrbanGround: From Local Perception to Spatial Agency in a Real-Scale City
- PDF CritICL: Inference-Time Weak-to-Strong Generalization from Small Language Model Failure Modes
- PDF WikiSkill: Compiling Agent Experience into Persistent Knowledge for Skill Evolution
- PDF Tacet: A Language and Type System for Automatic Statistical Validity Accounting
- PDF SWE-Prime: Fewer Trajectories, Better Performance
- PDF TTPO: Test-Time Policy Optimization
- PDF Do User-Authored Permission Policies Improve Protection Against AI Agent Overreach?
- PDF From Static to Dynamic: Benchmarking Real-World Code Review with MCR-Bench
- PDF RedEvoAgent: Automatic Red-Teaming Agent with Experience-Driven Skill Evolution
- PDF Disjoint and nearly disjoint sums of matrix multiplication tensors and their centroids
- PDF Mechanistic Reaction Prediction via Discrete Flow Matching on Graph-Structured Electron Occupation
- PDF Stochastic Estimation of Transduced Language Models
- PDF Persona-Execution Separation: An Architecture Pattern for Evolving LLM Agents under Execution Audit
- PDF Beyond F1: Evaluating Coverage and Failure Recovery in AI Model Security Scanners
- PDF misi: a Metric Inverted Sample Index
arXiv Quantitative Biology
- PDF Reservoir: A Large-Scale Simulated Dataset for Training and Evaluating Epidemiological Models
- PDF Conservative deterministic Markov models in mathematical biology: uniqueness of steady states, reversibility and computational methods
- PDF A Structural Theory of Admissible Transitions in Biological Reaction Networks
- PDF Sequential and distributive dual futile cycle: Hopf bifurcation can occur under parameter-rich kinetics but cannot occur under mass action kinetics
- PDF Surf_2_Volume: a workflow for converting CIFTI parcellations to NIfTI volume space
- PDF Beta oscillation changes in ALS: A Dual-Site International Replication Study
- PDF DINIRS: Digital Twin for Individualized Treatment Effects of Non-Invasive Respiratory Support Strategies
- PDF RegimeFormer: A Large Protein Model of Global Perturbation Regimes
- PDF GRAS: Guided Reduced-Variance Proposals and Adaptive Selection for Training-Free Reward Alignment in Discrete Diffusion
- PDF Predicting Quantifiability from Primary Screens to Prioritize Dose-Response Profiling
- PDF Hysteresis and multistability in network spreading with neuronal activity feedback
- PDF Cheaper by the Batch: Shared Traversal for Genotype Graph Editing
- PDF Interpreting Latent Protein Language Model Features with Geometric Annotations
- PDF Assessing mentalization in humans and large language models
- PDF CardioFusion-AI: Robust ECG--PPG Fusion for Multimodal Physiological Monitoring Under Signal Degradation
arXiv Quantitative Finance
- PDF Distribution-constrained optimal multiple stopping: the Root-type solution
- PDF A Temporal Multiplex Graph Neural Network for Systemic Risk Transmission in Global Banking
- PDF On the approximation of posterior laws in compound loss models by conditional Wasserstein GANs
- PDF Traveling Waves in Equity Markets with Rank-Based Entry and Exit
- PDF Tabular Deep Learning for Algorithmic Trading: Cross-Regime Bayesian Optimisation for Equity Signal Generation
- PDF Interpretable hybrid credit scoring for thin-file and underbanked populations
- PDF DTD-VAE: Disentangled Temporal Dependencies VAE for Credit Risk Prediction
- PDF Output-Only Identification and Spectral Monitoring of Coupled Feedback Networks with Known Time-Varying Actuation
- PDF On the hedging problem in general 1D diffusion markets
- PDF NatPar: Natural Parametric Modeling
- PDF Harvesting the Volatility Risk Premium: A Learning-to-Rank Approach
- PDF Lead-Lag Relationships in Financial Markets: A Comparison of Multiple Clustering Algorithms
- PDF $\texttt{findr}$: Transparent and Fair Credit Risk Decisions through Semi-Structured Regressions
- PDF Generalizing Markowitz Portfolio Optimization by a Quadratic Risk Measure
- PDF Capital allocation on decentralized lending platforms