Protein Data Bank
- 3D 10AH: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 N530D mutant complexed with trans-BAS-2
- 3D 10AI: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 N530D mutant complexed with cis-BAS-2
- 3D 10BR: Crystal structure of B. burgdorferi HtrA PDZ1-2 domains
- 3D 10HA: Crystal Structure of Honeybee (Apis mellifera) omega class glutathione S-transferase AmGST-O1
- 3D 10HM: Trypanosoma brucei CLK1 kinase domain in complex with a covalent Amidobenzimidazole (AB4) inhibitor
- 3D 10SD: The cryoEM structure of T10 type2 nanofiber
- 3D 10SG: The CryoEM structure of T12 type1 nanofiber
- 3D 10SH: The CryoEM structure of T12 type2 nanofiber
- 3D 11MG: Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
- 3D 11MH: Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
PDB Nitrogen Cycle
- 3D 12RH: Structure of turkey hemoglobin A covalently bound with epigallocatechin gallate
- 3D 21EJ: Crystal structure of a cupin protein (tm1459, H52A mutant) soaked in CuSO4
- 3D 23UB: Structure of the CYP102A1 Heme Domain with 2-(undecylcarbamoyl)benzoic acid
- 3D 23UH: Structure of the CYP102A1 Heme Domain with 2-(undecylcarbamoyl)benzoic acid and benzene
- 3D 27IL: Crystal structure of Imine Reductase Mutant(R7) from Actinoalloteichus hymeniacidonis in complex with NADPH
- 3D 29OI: AetF, a single-component flavin-dependent tryptophan halogenase, in complex with 8-bromotryptoline
- 3D 9EAX: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT V164M)
- 3D 9EAY: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT H183Y)
- 3D 9EAZ: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT A229T)
- 3D 9EB0: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT D211N)
PDB Photosynthesis
- 3D 22VL: Cryo-EM structure of Chlamydomonas reinhardtii chloroplast F1Fo-ATP synthase
- 3D 23UB: Structure of the CYP102A1 Heme Domain with 2-(undecylcarbamoyl)benzoic acid
- 3D 23UH: Structure of the CYP102A1 Heme Domain with 2-(undecylcarbamoyl)benzoic acid and benzene
- 3D 27IL: Crystal structure of Imine Reductase Mutant(R7) from Actinoalloteichus hymeniacidonis in complex with NADPH
- 3D 29OI: AetF, a single-component flavin-dependent tryptophan halogenase, in complex with 8-bromotryptoline
- 3D 9EAX: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT V164M)
- 3D 9EAY: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT H183Y)
- 3D 9EAZ: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT A229T)
- 3D 9EB0: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT D211N)
- 3D 9EB1: CRYSTAL STRUCTURE OF THE FMN-BINDING DOMAIN OF HUMAN CYTOCHROME P450 REDUCTASE (MUTANT T142A)
PDB PFAS Degradation
- 3D 9HLN: Crystal structure of MnmA D100C mutant from Streptococcus pneumoniae with [4Fe-4S] cluster in complex with formate
- 3D 9RFP: Peptidedeformylase XisD in complex with formiate
- 3D 9Q1E: Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
- 3D 9Q6O: Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
- 3D 9VBQ: Crystal structure of FXR in complex with agonist XJ02862-S2
- 3D 9VBR: Farnesoid X Receptor Agonists_FXR fused with a HD3 peptide
- 3D 9ZLK: Cryo-EM structure of MgtA with bound AMPPCP and magnesium
- 3D 24UU: Crystal structure of Endonuclease IV from Chlamydophila pneumoniae
- 3D 9Z11: Crystal Structure of the Poly(Hexamethylene Adipamide) (Nylon66) Hydrolase Nyl50 in Complex with Butyrate at Room Temperature
- 3D 24HR: Human KRAS G12D (GDP-bound) in complex with macrocyclic peptide inhibitor AP6252
Project Gutenberg
- Meditations EPUB PDF
- Don Quixote EPUB PDF
- The Wonderful Wizard of Oz EPUB PDF
- Wuthering Heights EPUB PDF
- The Critique of Pure Reason EPUB PDF
- Romeo and Juliet EPUB PDF
- The Secret Garden EPUB PDF
- The Secret Garden EPUB PDF
- Anna Karenina EPUB PDF
- A Princess of Mars EPUB PDF
- A Christmas Carol EPUB PDF
- Frankenstein EPUB PDF
- Pygmalion EPUB PDF
- Bleak House EPUB PDF
- Siddhartha EPUB PDF
GitHub bioRxiv
-
mims-harvard/ToolUniverse
1478
Python
Democratizing AI scientists with ToolUniverse
-
JSONbored/awesome-claude
266
MDX
HeyClaude is a curated registry and distribution surface for Claude and AI-workf...
-
JW-Sidhom-Lab/tessera
5
Python
A Foundation Model for the Cancer Genome
-
anthropics/knowledge-work-plugins
21377
Python
Open source repository of plugins primarily intended for knowledge workers to us...
-
dbcls/togomcp
9
Python
MCP server for the RDF Portal (Public version)
-
pnnl/fast.ssgsea
5
R
A high-performance variant of pre-ranked Gene Set Enrichment Analysis (GSEA) tha...
-
BiaPyX/BiaPy
202
Jupyter Notebook
Open source Python library for building bioimage analysis pipelines
-
zoey-rw/SoilMicrobeDB
12
R
A whole-genome reference database of soil bacteria, fungi, and archaea
-
NeurosnapInc/Prot2Prop
12
Python
Structure-aware fine-tuning of protein language models for joint prediction of m...
-
Imbad0202/academic-research-skills
32923
Python
Academic Research Skills for Claude Code: research → write → review → revise → f...
Synthetic Biology
- Combined exposure to hypoxia and 17α-ethinylestradiol alters reproductive traits in marine medaka.
- Synergistic dual ring-cleavage pathways enable efficient degradation of chlorobenzenes by Pseudomonas putida BS-1 in groundwater.
- Innovative Utilization of Bamboo for High-Yield Vitexin Production: Strategies and Optimization.
- Tardigrade-Derived Strategy for Low-Cost Storage of Cell-Free Expression Lysates.
- SARGE: Serine Integrase-Assisted Rapid Genome Integration through Cassette Exchange in Escherichia coli.
- High-Efficiency Production of N-Acetyllactosamine (LacNAc) Using a Cell-Coupled Biocatalytic Strategy with Engineered Escherichia coli and Saccharomyces cerevisiae.
- AtGLYI3 and AtGLYI6 play the major role in nickel stress tolerance in Arabidopsis thaliana.
- Bioactivity assessment of selenium nanoparticles biosynthesized by Akkermansia muciniphila.
- Replication stress induced exposure to methotrexate in root meristem cells of Vicia faba.
- The transcriptional regulator MOS1 attenuates salinity stress-induced seed germination inhibition via negative feedback regulation of ABA signaling in Arabidopsis.
- AGAMOUS Coordinates Flower Development Beyond Organ Identity: AGAMOUS Coordinates Flower Development in Space and Time.
- The elansolids: how nature shows chemists how to tamep-quinone methides.
- Discovery of a Unique NRPS Gene Cluster San for the Biosynthesis of Anti-Phytopathogenic and Cytotoxic Sansalvamides in the Endophytic Fusarium sp. R1.
- Bacterial mRNA Vaccines: Programming Immunity Against Antimicrobial Resistance.
- Product-Responsive Regulation of NADPH and Malonyl-CoA Allocation Enhances 3-Hydroxypropionic Acid Production in Escherichia coli.
Biotechnology
- The Ethics of Extending Life: Longevity Medicine and Health Inequity.
- Protocol for connector-enabled multigene pathway assembly using Golden Gate Assembly and yeast recombination.
- Microglial clonal dynamics and the impact of clonal hematopoiesis in autologously transplanted rhesus macaques.
- Copper-only Superoxide dismutase 6 contributes to reactive oxygen species regulation, genotoxic stress tolerance and virulence in Candida albicans.
- CRISPR/Cas9-mediated miR-21 editing in high-grade urothelial carcinoma cells and its biological effects.
- Male-Biased Social Deficits in Chd8(+/R2219*) Mouse Model of Autism Linked to Hippocampal Abnormalities.
- Mammalian growth factors enhance regeneration in transgenic tomato lines.
- RNA design: update on computational frameworks and programs for inverse RNA folding.
- Expanding the scope of precision editing in seaweeds through the application of a novel CRISPR-Associated Nuclease 12a (Cas12a) -aligned CRISPR system in Ulva prolifera.
- Conserved and Lineage-Specific Roles of KEA-Mediated Ion Homeostasis in Chlamydomonas.
- Inborn Errors of Metabolism: Pathophysiological Insights, Diagnostic Advances, and Evolving Treatment Paradigms.
- Discovery of a Unique NRPS Gene Cluster San for the Biosynthesis of Anti-Phytopathogenic and Cytotoxic Sansalvamides in the Endophytic Fusarium sp. R1.
- Intercalation of DNA nucleobases inside bilayer graphene and bilayer MoS(2): a comparative DFT study.
- Correction: A rapid, multiplex, one-pot CRISPR/Dx system for visual detection of influenza A, influenza B, and respiratory syncytial viruses.
- Improving Nitrogen Use Efficiency in Wheat: Integrating Agronomic, Genomics, and Remote Sensing for Sustainable Production.
AI & Machine Learning
- Full-spectrum EEM end-member unmixing with statistical validation: A deep learning framework for organic pollution source apportionment in complex watersheds.
- Artificial intelligence industrial agglomeration and innovation in key green technologies: Evidence from China.
- Assessment of water supply-demand matching under intensive human activities from the perspective of ecosystem service synergies and trade-offs: A case study in the Haihe River Basin of China.
- Dual-CNN-based AI framework for patient-specific design of short femoral stems.
- DDVMM: A dual-branch pyramid model for mono-modal medical image registration.
- Ratiometric copper nanocluster fluorescence probe coupled with deep learning for intelligent recognition of tetracycline antibiotics in food.
- Noninvasive identification of proliferative hepatocellular carcinoma based on CEUS quantitative morphological feature.
- Super-resolution deep learning-enhanced 2D MRCP improves main pancreatic duct visualization compared with 3D MRCP.
- Lower-Leg muscle index Identifies High-Risk Peripheral artery disease Patients: Mortality prediction via Machine learning.
- Current progress and obstacles for automated classification of causes of death based on death certificates: A systematic review.
- Exploring risk factors for long-term sickness absence during emerging adulthood: Continuous and discrete time models using Young-HUNT data on psychological distress and chronic pain.
- Development and external validation of an interpretable machine learning model for early prediction of stroke-associated pneumonia: a multicenter study.
- Convolutional neural network analysis of Diaphorina citri (Hemiptera: Liviidae) vibrational communication signals for enhanced mating disruption.
- The Ethics of Extending Life: Longevity Medicine and Health Inequity.
- Online Sepsis Prediction Using Vital Signs and Multiscale Temporal-Aware Contrastive Learning: Model Development and Validation Study.
Neuroscience
- Transcranial ultrasound tomography for neonatal brain imaging: A feasibility study.
- Effects of high-dose vitamin D supplementation in patients with multiple sclerosis: A systematic review of efficacy and safety.
- Recent advances in HDAC-based multi-target inhibitors.
- Development and external validation of an interpretable machine learning model for early prediction of stroke-associated pneumonia: a multicenter study.
- Association between persisting peritumoral brain edema and seizures as well as worse functional outcome after meningioma surgery: a retrospective study of 218 patients.
- Outside-in foraminal access for cervical dumbbell tumors: a surgical paradigm shift with technical insights and clinical outcomes.
- Impact of a standardized documentation template on hospital case mix index and reimbursement for patients with traumatic brain and spine injuries.
- Incomplete tumor resection, central neuroradiological review, and second surgery in pediatric patients with intracranial ependymoma treated in the E-HIT2000 trial.
- ALTEPLASE AND METHYLPREDNISOLONE ASSOCIATED TREATMENT MODULATE MICROCIRCULATION AND INFLAMMATION ON BRAIN DEATH DONORS.
- Multimodal investigation of neuropathic pain mechanisms in focal spinal lesions.
- Merging neural stimulation and exoskeletons to enhance sensorimotor hand functions after brain or spinal cord injury.
- CXCL16-mediated recruitment of γδ T cells to the brain reduces sociability in mice.
- Multi-tier signaling and chromatin remodeling coordinate microglia inflammatory states and activities associated with demyelination.
- Microglial clonal dynamics and the impact of clonal hematopoiesis in autologously transplanted rhesus macaques.
- Embryonic dopaminergic neuron activity sustains lifelong locomotion in Drosophila.
Climate Science
- Microbial and anthropogenic controls on global soil nitrogen mineralization efficiency.
- Regulating microclimatic conditions and vegetation succession in European wet meadows through mowing regime.
- Relative contribution of climate forcing and ice phenology to water quality in surface and deep layers of an arctic lake: Results from 44 years of in-situ measurements.
- Limited impact of Greenland meltwater on abruptness and reversibility of future Atlantic overturning changes.
- Extreme weather effects on marine predator breeding outcomes in a global climate change hotspot.
- Toxicity assessment of green energy by-product, lithium, using a novel suite of eight Australian aquatic-species tests from a Global Biodiversity Hotspot.
- From Supplement to System: Elevating Traditional Knowledge in Pacific Marine Science.
- Climate-driven natural disturbances and wildfire regimes: Enhancement of ecosystem resilience.
- Estimation of the population size of the northern white-cheeked gibbon (Nomascus leucogenys) in Vu Quang National Park, Vietnam.
- Wildfires of war in Ukraine: Implications for fire governance in a changing world.
- Cold-water fisheries in a warmer world: Increasing temperature redistributes angling effort and concentrates activity in cold-water refugia.
- Acute toxicity of metals in Rhinella diptycha and Leptodactylus fuscus at different temperatures: a perspective for tropical tadpoles.
- Decision-making framework for response and management of environmental disasters (FRaMED).
- Wetland Type Matters: Tree Community Structure and Carbon Sequestration Dynamics Along a Tropical River Basin.
- Assessing Climate Adaptation Among Canada Lynx (Lynx canadensis) Populations at the Trailing Edge.
Medicine
- Cholic acid derivatives as novel PTP1B inhibitors: Their synthesis, inhibition mechanism, and hypoglycemic effects.
- In silico identification and prioritization of potential drug targets in Wuchereria bancrofti: Profilin as a promising therapeutic candidate.
- Decoding nucleic acid modification regulatory networks: A key to cancer intervention and treatment.
- Multi-institutional international investigation of VMAT treatment planning techniques for breast cancer with regional lymph nodes.
- Minocycline as a therapeutic candidate in diabetic retinopathy: insights into pathophysiology and translational potential.
- Spirulina platensis and β-glucan mitigate cyclophosphamide-induced Immunosuppression in broilers: Differential effects of preventive and therapeutic strategies via redox-inflammatory modulation.
- Lack of alpha1,2-fucosylation protects mice from bleomycin-induced lung fibrosis: A quantitative proteomic analysis of bronchoalveolar lavage fluid.
- Single-cell and spatial transcriptomics reveal lactate-active epithelial-immune cell crosstalk that reprograms the immune microenvironment in colorectal cancer.
- Effects of high-dose vitamin D supplementation in patients with multiple sclerosis: A systematic review of efficacy and safety.
- Ignoring the solid phase significantly underestimates estrogenic steroid hormones in dairy shed effluent and effluent treatment systems.
- Recent advances in HDAC-based multi-target inhibitors.
- Discovery of furan-trimethoxyphenyl hybrids as novel colchicine-binding site inhibitors that induce mitotic catastrophe with potent anti-acute myeloid leukemia effect.
- Allosteric PTP1B inhibition as a source of multi-mechanistic anti-tumor activity.
- Discovery of selective CDK9 degraders with anti-AML activity using PROTAC technology.
- Biomimetic cellulose polysaccharide hydrogel with in situ "epidermal armor" for hemostasis, antimicrobial protection, and wound healing.
Genomics
- Single-cell and spatial transcriptomics reveal lactate-active epithelial-immune cell crosstalk that reprograms the immune microenvironment in colorectal cancer.
- Unraveling the anti-listerial activity of noni fruit essential oil: Omics-based mechanistic insights and application in salmon preservation.
- Qi Wei Zhi Gan formulation alleviates progressive fibrosis in metabolic dysfunction-associated steatohepatitis through suppressing Peroxidasin-collagen IV crosslinking.
- Huaganjian decoction attenuates liver fibrosis via purine metabolic-inflammatory synergistic crosstalk: network pharmacology combined with multi-omics analyses.
- Tumor-associated epilepsy at diagnosis in glioblastoma patients reveals an inflammatory molecular signature and is associated with better overall survival.
- The Ethics of Extending Life: Longevity Medicine and Health Inequity.
- Metabolic cross-talk promotes persistence of Enterococcus in a model of polymicrobial catheter-associated urinary tract infection.
- Pioneer-factor activity requires stable chromatin occupancy mediated by both sequence-specific binding and disordered protein domains.
- Single-nucleus transcriptomics resolves multiple fate dynamics between inflorescence meristem and primary stem.
- Protocol to maximize single-nuclei multiome library complexity for limited primary tissues via optimized sample preparation and library synthesis.
- Cunninghamia lanceolata genome illuminates the evolutionary dynamics of gymnosperms.
- Multi-tier signaling and chromatin remodeling coordinate microglia inflammatory states and activities associated with demyelination.
- Remodeling of the immune-metabolic landscape triggered by long-term high-altitude exposure.
- Electric Field-Induced Release and Measurement Liquid Biopsy of Urinary Transcriptomics and Key Proteins from Normal and High-risk Pregnant Women.
- Cardiovascular Genetic Epidemiology in the Genome-Wide Era: From Association Discovery to Mechanistic Dissection and Clinical Translation.
Immunology
- Augmenting hepatitis C E1E2 glycoprotein antibody detection via an alternative lectin-assisted mannose-binding ELISA.
- Combination adjuvants: clinical value and mechanisms of action.
- Engagement Trends in Online Vaccine Content: Longitudinal YouTube Study.
- Pearls & Oy-sters: Radiologic Lag in Pediatric-Onset Multiple Sclerosis.
- Glofitamab Induces Complete Responses in Relapsed and Refractory Primary Central Nervous System Lymphoma.
- Bioactive enhanced adjuvant chemokine oligonucleotide nanoparticles (BEACONs) for mucosal vaccination against genital herpes.
- Immunosuppressive myeloid cells induce mesenchymal-like breast cancer stem cells by a membrane-bound TGF-β1-dependent mechanism.
- Public antibody clonotypes and deep learning identify SARS-CoV-2 and HIV broadly neutralizing antibodies in immune repertoires.
- Trans-presentation of IL-6Rα by macrophages drives colorectal cancer development.
- Remodeling of the immune-metabolic landscape triggered by long-term high-altitude exposure.
- Research on the Diagnostic Potential of miR-383-5p in Rheumatoid Arthritis.
- Nirsevimab Implementation and Primary Management of Lower Respiratory Tract Infections in Infants in Spain: A Quasi-Experimental Study.
- Disseminated Tuberculosis and Early-Onset SLE in a Child with a Novel STAT1 Gain-of-Function Mutation: a Case Report.
- Biophytum sensitivum: a promising herbal diet supplement for enhancing growth, immune response, antioxidant status, and disease resistance in Nile tilapia (Oreochromis niloticus).
- Self-reported vaccine hesitancy and refusal among parents of children with autism spectrum disorder and other developmental delays: a cross-sectional study.
Microbiology
- Physiotherapy management of Long-COVID: an evidence-based approach.
- Performance of moving bed biofilm, periphyton, and halophyte biofilters in marine multi-trophic aquaculture systems.
- Public antibody clonotypes and deep learning identify SARS-CoV-2 and HIV broadly neutralizing antibodies in immune repertoires.
- RasGEFs Play Essential Roles in the Biology of Sclerotinia sclerotiorum and Botrytis cinerea and Can Be Used as HIGS Targets for Disease Management.
- Habitual Ultra-processed Food Intake Is Associated with Gut Dysbiosis and Pro-inflammatory Metabolite Profiles in Korean Patients with IBD.
- Research trends and emerging topics in antifungal therapeutic drug monitoring: a bibliometric analysis with implications for clinical pharmacy practice.
- Trends in pathogens causing microbial keratitis in studies conducted in Mexico: a 38-year literature review.
- The microbiology of amniotic fluid sludge: a systematic review and meta-analysis.
- From Health to Disease: A Comprehensive Review of Ocular Surface Microbiota and Detection Methods in Dry Eye.
- Digesting the Data: Overview of Foodborne Outbreaks in Canada Submitted to Outbreak Summaries, 2008-2023.
- Nutrition as a regulator of hematopoietic stem cell biology and transplantation.
- Metabolomic Profiling of Plasma Bile Acids in Resectable Gastric Cancer.
- Do Not Treat a Sequencing Report: Therapeutic Stewardship in Endometrial Microbiome Testing.
- Core Competencies of Nurses Working in Hospital Infection Prevention and Control: A Scoping Review and Cluster Analysis.
- Establishing the Epidemiological Cut-Off Value (ECOFF) for Cefquinome Against Staphylococcus aureus Using Standardised MIC Data.
Evolutionary Biology
- Relating perivascular imaging measures to longitudinal lesion evolution and chronic inflammation in multiple sclerosis.
- Engineering of MnO(2)-RuO(2) for efficient alkaline hydrogen evolution reaction and stable ampere-level anion exchange membrane water electrolysis.
- Steering moderated intermediate adsorption and lattice oxygen activation via Ce and B co-doped CuCo catalysts for efficient dual-pathway oxygen evolution and Zn-air batteries.
- Evolution of hierarchical phase-contrast tomography on the European Synchrotron beamlines BM05 and BM18: a whole adult human brain imaging case study.
- C.H. Waddington's lasting achievements in development and evolution.
- Miniaturization in robotic surgery: a bibliometric and science mapping analysis of technological evolution and clinical translation (1996-2026).
- Emergence, evolution, and global dissemination of antimicrobial resistance: A One Health review.
- Aluminum-Triggered Dealloying for Hierarchical Porous High-Entropy Alloy Electrodes Enabling Industrially Stable Oxygen Evolution.
- 2M Phase Engineering of W(1-x)Mo(x)S(2) Alloy Nanosheets for Enhanced Catalytic Hydrogen Evolution Reaction.
- A culturomics biobank decodes extremophile evolution and metabolism in acid mine drainage.
- Regulation of Pore Evolution via Progressive Electroporation Enhanced Intracellular Molecule Transport.
- Ivermectin in veterinary medicine: a narrative review of antiparasitic efficacy, resistance evolution, antiviral evidence, and One Health implications.
- Phylogenetic and Environmental Insights Into the Biogeography of the Western Blacknose Dace, Rhinichthys obtusus.
- From Germline Susceptibility to Therapeutic Vulnerability: DNA Damage Response Gene Mutations Driving Multiple Myeloma Evolution and Precision Therapy.
- [Recruitment of foreign nurses under temporary recognition in Piedmont: evolution of migration flows and trasformation of the healthcare labor market (2020-2026)].
Molecular Ecology
- Regulating microclimatic conditions and vegetation succession in European wet meadows through mowing regime.
- Rainfall deficit reduces biodiversity and destabilizes a saline-soil plant community.
- Toxicity assessment of green energy by-product, lithium, using a novel suite of eight Australian aquatic-species tests from a Global Biodiversity Hotspot.
- Climate-driven natural disturbances and wildfire regimes: Enhancement of ecosystem resilience.
- Estimation of the population size of the northern white-cheeked gibbon (Nomascus leucogenys) in Vu Quang National Park, Vietnam.
- Wetland Type Matters: Tree Community Structure and Carbon Sequestration Dynamics Along a Tropical River Basin.
- BeeGees: A High-Throughput Protein-Coding DNA Barcode Recovery Pipeline Tailored for Genome Skims of Museum Specimens.
- Challenges and opportunities in African-led bioprospecting: towards a sustainable natural products pipeline.
- Invisible invaders: A new warning flag for molecularly detected alien species (MODAS) in databases and information systems.
- Nano-plastic contamination in soil: impacts on rhizosphere volatile organic compound (VOC) signaling and rice disease susceptibility-a comprehensive review.
- Research trajectory and long-term trends of dissolved organic carbon in freshwater systems.
- A dataset of 352 nuclear genes for accurate species identification and geographical origin traceability of Rhododendron dauricum L.
- A multi-source remote sensing dataset for large-scale forest monitoring.
- Discovery of Fissidens pokhrensis (Fissidentaceae) in China and an updated key to Chinese species with semilimbate leaves and papillose or mammillose laminal cells.
- Determinants of Bird Richness in the Louzishan National Nature Reserve: Effects of Productivity and Habitat Heterogeneity Across Taxonomic and Functional Dimensions.
arXiv Physics
- PDF State estimation of Rayleigh-Bénard convection with reduced-order models
- PDF A Defect-Free Model of Amorphous Silicon with Pristine Electronic Structure
- PDF West Nile virus outbreak in Italy modelled with the quantum Game of Life
- PDF Optimal Order of Multi-Agent and General Many-Body Systems
- PDF Agentic Symbolic Search: Characterizing PDEs Beyond Hand-crafted Expressions, Meshes, and Neural Networks
- PDF Polaronic hybridization of atoms, dimers and trimers in a Bose-Einstein condensate
- PDF Plasma Etch Process Optimization for Photonic-Grade Diamond-on-Insulator Substrates and Thickness Evaluation using Colorimetry
- PDF Efficient and Accurate Image Reconstruction for Geometric-Inconsistent Multispectral CT with Ray-Dependent Energy Spectra
- PDF Attosecond Path Qubits in High-Harmonic Generation: Classical Dephasing and Trace-Out Decoherence
- PDF Determination of the intrinsic mechanical quality factor in high-stress silicon nitride resonators
- PDF Planar Lagrangian transport and scalar-gradient organization in a turbulent reacting shear layer
- PDF Observation of alignment tensor effects in metastability-exchange collisions with highly polarized 3He ensembles
- PDF Constrained hybrid modelling to predict microbial dynamics and organic matter turnover in soil systems
- PDF Effective Faraday interaction between light and Helium-3 nuclear spins in a multi-pass cell
- PDF Quantum-classical physics-informed Kolmogorov-Arnold networks for PDEs
arXiv Mathematics
- PDF Optimal Deterministic Multicalibration and Omniprediction
- PDF The Token Is a Group Element: On Lie-Algebra Attention over Matrix Lie Groups
- PDF On Second-Order Methods for Bilevel Optimization
- PDF Positive Scalar Curvature Obstructions via Singular Dimension Descent
- PDF Approximation and interactive design with exact 3D elastic curves
- PDF Planar constant piecewise smooth vector fields with large hysteresis
- PDF On the Emergence of Discrete Spectrum for Weakly Disordered Schrödinger Operators
- PDF CLUSTER: Derivative-free optimization of smooth functions with parameter-change costs
- PDF CoarseSolvers for Exascale Solution of Poisson Problems
- PDF Strong non-principality of positive codegree Turán density
- PDF Minimizers for Coulomb gases constrained to a halfspace
- PDF The alignment time function
- PDF Leveraging tails for adaptation
- PDF Invariants of the Colored Braid Groupoid
- PDF Rigidity of coarsely minimal Reeb flows
arXiv Computer Science
- PDF JanusMesh: Fast and Zero-Shot 3D Visual Illusion Generation via Cross-Space Denoising
- PDF MemoryWAM: Efficient World Action Modeling with Persistent Memory
- PDF TimeProVe: Propose, then Verify for Efficient Long Video Temporal Reasoning in Activities of Daily Living
- PDF How Transparent is DiffusionGemma?
- PDF UNIEGO: Proxies as Mediators for Unified Egocentric Video Representation Learning
- PDF Optimal Deterministic Multicalibration and Omniprediction
- PDF Thinking in Boxes: 3D Editing in Real Images Made Easy
- PDF Structuring and Tokenizing Distributed User Interest Context for Generative Recommendation
- PDF From Efficiency to Leakage -- Privacy Backdoor in Federated Language Model Fine-Tuning
- PDF Easy Reads: A Python program for making Scientific Papers on arXiv more Reader Friendly and Accessible
- PDF Generating Robot Hands from Human Demonstrations
- PDF The Token Is a Group Element: On Lie-Algebra Attention over Matrix Lie Groups
- PDF Predictability as a Fine-Grained Measure for Privacy
- PDF Current World Models Lack a Persistent State Core
- PDF Toward Calibrated Mixture-of-Experts Under Distribution Shift
arXiv Quantitative Biology
- PDF West Nile virus outbreak in Italy modelled with the quantum Game of Life
- PDF Synchronization modes in bipartite oscillator networks
- PDF bioETH-Beacon: A Confidential On-Chain Genomic Beacon with Encrypted Counts, Filters, and Bounded Noise over a Fully Homomorphic EVM
- PDF DeepForestVisionV2: Ecology-Driven Taxonomy Expansion for Camera-Trap Monitoring in African Tropical Forests
- PDF MedRLM: Recursive Multimodal Health Intelligence for Long-Context Clinical Reasoning, Sensor-Guided Screening, Evidence-Grounded Decision Support, and Community-to-Tertiary Referral Optimization
- PDF Quadratic Forms for Measuring Geometric Trees in 3-dimensional Space
- PDF Oscillations and Spatial Patterns in Large-Scale Stochastic Gene Regulatory Networks
- PDF Robust probabilistic measurement of structural-functional module consistency in infant brain development
- PDF CollaboratoR: A scalable workflow for collaborative data entry and management
- PDF Retrieval-Based Brain Decoding by Alignment, not Complexity
- PDF Multi-type branching inference on contact trees with application to COVID-19
- PDF BioHarness: Substrate-Aware Evidence Assembly for Biomedical Question Answering across Literature, Knowledge Bases, and Biological Atlases
- PDF Contextualizing Biological Language Models across Modalities via Logit-Space Contrastive Alignment
- PDF scGTN: Deep Siamese Graph Transformer Network for Single-cell RNA Sequencing Clustering
- PDF Can neurons speak? Semantic narration of vision at single-cell resolution
arXiv Quantitative Finance
- PDF Optimal Order of Multi-Agent and General Many-Body Systems
- PDF Advanced Calibration Analysis and Tools: Identifying Influential Observations in Stochastic Interest Rate Model Calibration
- PDF Trends, Volatility, Correlations, and Critical Phenomena in Financial Markets
- PDF How to spot outliers: an Ensemble Anomaly Detection Framework
- PDF AI Economist Agent: An Agentic Framework for Model-Grounded Economic Analysis with RAG, Knowledge Graphs, and Large Language Models
- PDF Which Portfolios? The Construction Dependence of Factor Model Performance
- PDF Do Prediction Markets Match Option Prices? Bitcoin Threshold Evidence from Binance and Polymarket
- PDF DeXposure-Claw: An Agentic System for DeFi Risk Supervision
- PDF Fitting Accumulated Stock Returns with Tempered Skew t-Distribution
- PDF An extendable, integrated, and dynamic approach to forecasting and stress-testing credit risk
- PDF Collective completeness and pricing-hedging duality II
- PDF Optimal Consumption and Retirement Time under Shortfall Risk Measure
- PDF The Gini-Bayes Connection: The CAP Slope as Bayes' Theorem, with Applications to Weight of Evidence, Somers' $D$, and Calibration
- PDF Conformal Prediction Intervals with Tail-Specific Guarantees
- PDF Continuous-time Optimal Stopping through Deep Reinforcement Learning